| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4240 |
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| Symbol | valS |
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| ID | 6113209 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 4679028 |
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| End bp | 4681874 |
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| Gene Length | 2847 bp |
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| Protein Length | 948 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641624034 |
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| Product | valyl-tRNA synthetase |
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| Protein accession | YP_001751089 |
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| Protein GI | 170723401 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0525] Valyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.174379 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAAGA CCTACCAGCC GCACGCCATC GAAACTTCCT GGTACAACAC CTGGGAGTCC
GAAAACTATT TCGCTCCACA AGGTGCAGGT GAGTCCTACA CCATCATGAT CCCGCCACCG
AACGTGACGG GTAGCCTGCA CATGGGCCAC GGTTTCAACA ACGCGATCAT GGACGCCCTG
ATCCGTTTCC GTCGCATGCA GGGCCGCGAC ACCCTGTGGC AGCCGGGTAC CGACCACGCC
GGTATCGCCA CCCAGATGCT GGTCGAGCGC CAGCTCGAAG CCAAGGGCCA GAACCGTCAC
GACCTCGGCC GTGACGCCTT CCTGGACAAG GTCTGGGAAT GGAAAGAGCA GTCTGGCGGC
AACATCAGCC GGCAGATCCG TCGCCTGGGC TCGTCGGTAG ACTGGAGCCG CGAACGCTTC
ACCATGGATG ACGGCTTGTC CGAAGCGGTC AAGGAAGCCT TCGTGCGCCT GCACGAAGAC
GGCCTGATCT ACCGTGGCAA GCGCCTGGTC AACTGGGACA CCAAGCTGCA CACGGCCATC
TCCGACCTCG AAGTGGAAAA CCATGACGAG AAGGGCCACC TGTGGAACCT ACGCTACCCG
CTGGCCGACG GTGCCAGAAC TGCCGACGGC CAGGATTACC TGGTGGTTGC CACCACCCGC
CCGGAAACCC TGCTGGGTGA CGCTGCGGTA GCGGTCAACC CGAACGATGA GCGCTACCAG
GCACTGATCG GCAAGTTCGT CGAGTTGCCA CTGGTCGGCC GTCGCATCCC GATCATCGCC
GATGACTACT GCGACCCCGA GTTCGGTACC GGCTGCGTGA AGATCACCCC GGCACATGAC
TTCAATGACT ATGAAGTGGG CAAGCGCCAC AACCTGCCGC TGCTCAACAT CTTCGACAAG
AACGCCTTGG TGCTGCCCGC CGCCCAGGCA TTCAACCTCG ATGGCAGCGT CAATGAGCAA
GCCGACACCC GCCTGCCCGC CCAGTACGCC GGCCTCGACC GGTTCGTCGC GCGCAAGCAG
ATCGTCGCCG ACCTGGACGC TCAGGGGCTG CTGGTCAGCA TCGACGACCA CGCTTTGAAA
GTACCGAAGG GCGACCGCTC CGGCACCATC ATCGAGCCAT GGCTGACCGA CCAGTGGTAC
GTCTCCACCA AACCGCTGGC CGAGCCTGCG ATTGCTGCCG TTGAAGATGG CCGCATCCAG
TTCGTGCCCA AGCAGTACGA AAACATGTAC TTCTCCTGGA TGCGCGACAT CCAGGATTGG
TGCATCAGCC GTCAGCTGTG GTGGGGCCAC CGGATCCCGG CCTGGTACGA CGAGGCCGGC
CAGGTCTATG TCGGCCGCAA CGAAGCCGAA GTGCGCGCCA AGCACAACCT GGGCGCCGAC
GTGGTCTTGC GCCAGGACGA CGACGTGCTC GACACCTGGT TCAGCTCGGG GCTGTGGACC
TTCTCCACCC TCGGCTGGCC GGAGCAGACC GAATTCCTCA AGAAATTCCA CTCCACCGAC
GTGCTGGTCA CAGGCTTTGA CATCATCTTC TTCTGGGTTG CCCGGATGAT CATGCTGACC
ATGCACCTGA TCAAGAACGA GGATGGCACC CCGCAGGTTC CGTTCAAGAC CGTGTATGTG
CACGGCCTGG TACGTGACGG CCAGGGCCAG AAGATGTCCA AGTCCAAGGG CAACGTGCTT
GACCCGCTGG ACATCGTTGA CGGCATCACC CTGGACGCCC TGCTGGAAAA ACGCACCAGC
GGCATGATGC AGCCCAAGCT GGCCGAGAAG ATCGCCAAGC AGACCAAGGC CGAGTTCCCG
GAAGGCATTG CCAGCTACGG CACCGACGCC CTGCGCTTCA CCTTCTGCTC GCTGGCCTCC
ACTGGCCGCG ACATCAAGTT CGACATGGGC CGCGTCGAAG GCTATCGCAA CTTCTGCAAC
AAGATCTGGA ACGCCGCCCG CTATGTGCTG GACAAAGGCG AGGACTGCGG CCAGAACGGC
GAAGCCTACG AGCTGTCGCT GGCCGACCGC TGGATCATCT CGCAGCTACA ACGCACCGAA
GCCGAAGTAA CCCGCCAGCT CGAGCAGTTC CGTTTCGACC TAGCCAGCCA GGCCCTGTAC
GAGTTCATCT GGAACCAGTA CTGCGACTGG TACCTGGAGC TGTCCAAGCC GGTACTGTGG
GACGAAAACG CTCCGGTAGA GCGCGCCCGC GGCACCCGCC GCACCTTGGT GCGCGTGCTG
GAAGTGGCGC TGCGCCTGGC TCATCCGTTC ATGCCGTTCA TCACCGAAGA AATCTGGCAG
CGCATCGCGC CGCTGGCAGG CATCGACGGC AAGACCATCA TGCTCCAGCC GTGGCCAGTG
GCCAACGAAA GCCGCATCGA TGCCGCCGCC GAAGGCGATA TCGAATGGCT CAAGGAACTG
ATGGTAGGCC TGCGTAACAT CCGCGCCGAA ATGAACATCG GCCCGGGCAA GCCCCTGCCA
CTGTTCCTGA AGAACGCCAA CGCCGACGAC CAGCGCCGCC TGCAGGAAAA CGAAGCCCTG
CTCAAGAAGC TGGCCAAGGT CGAGTCGTTC ACCGTGCTCG GCGAGGCCGA CGAAGCGCCG
CTTTCGGCCA CCGCACTGGT GGGCGATCTG CAGGTGCTGG TGCCGATGGC CGGCCTGATC
GACAAGGACG CCGAGCTGGC TCGCCTGAAC AAGGAAATCC AGCGCCTGCA AGGTGAAGTG
CAACGCGTCG GCGGCAAGCT GTCGAACGCC GCCTTCGTCG ACAAGGCACC GCCTGCGGTG
ATCGAGAAGG AACGCGCCAA GCTGGCCGAG TCCGAGCAGG CCCTGGCCAA CTTCACCGAG
CAGCATGCGC GGATCGCTGC GCTGTAA
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| Protein sequence | MDKTYQPHAI ETSWYNTWES ENYFAPQGAG ESYTIMIPPP NVTGSLHMGH GFNNAIMDAL
IRFRRMQGRD TLWQPGTDHA GIATQMLVER QLEAKGQNRH DLGRDAFLDK VWEWKEQSGG
NISRQIRRLG SSVDWSRERF TMDDGLSEAV KEAFVRLHED GLIYRGKRLV NWDTKLHTAI
SDLEVENHDE KGHLWNLRYP LADGARTADG QDYLVVATTR PETLLGDAAV AVNPNDERYQ
ALIGKFVELP LVGRRIPIIA DDYCDPEFGT GCVKITPAHD FNDYEVGKRH NLPLLNIFDK
NALVLPAAQA FNLDGSVNEQ ADTRLPAQYA GLDRFVARKQ IVADLDAQGL LVSIDDHALK
VPKGDRSGTI IEPWLTDQWY VSTKPLAEPA IAAVEDGRIQ FVPKQYENMY FSWMRDIQDW
CISRQLWWGH RIPAWYDEAG QVYVGRNEAE VRAKHNLGAD VVLRQDDDVL DTWFSSGLWT
FSTLGWPEQT EFLKKFHSTD VLVTGFDIIF FWVARMIMLT MHLIKNEDGT PQVPFKTVYV
HGLVRDGQGQ KMSKSKGNVL DPLDIVDGIT LDALLEKRTS GMMQPKLAEK IAKQTKAEFP
EGIASYGTDA LRFTFCSLAS TGRDIKFDMG RVEGYRNFCN KIWNAARYVL DKGEDCGQNG
EAYELSLADR WIISQLQRTE AEVTRQLEQF RFDLASQALY EFIWNQYCDW YLELSKPVLW
DENAPVERAR GTRRTLVRVL EVALRLAHPF MPFITEEIWQ RIAPLAGIDG KTIMLQPWPV
ANESRIDAAA EGDIEWLKEL MVGLRNIRAE MNIGPGKPLP LFLKNANADD QRRLQENEAL
LKKLAKVESF TVLGEADEAP LSATALVGDL QVLVPMAGLI DKDAELARLN KEIQRLQGEV
QRVGGKLSNA AFVDKAPPAV IEKERAKLAE SEQALANFTE QHARIAAL
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