Gene PputW619_4229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_4229 
Symbol 
ID6113198 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp4666893 
End bp4667276 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content62% 
IMG OID641624023 
Productglycine cleavage system protein H 
Protein accessionYP_001751078 
Protein GI170723390 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0509] Glycine cleavage system H protein (lipoate-binding) 
TIGRFAM ID[TIGR00527] glycine cleavage system H protein 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.012135 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAGT TGCGTTTCAC TGAAGATCAC GAATGGCTGC GCGTCGAAGC TGACGGTAGC 
GTCACCGTAG GCATCACCGC CTACGCCCAG AACGCCCTCG GCGATGTGGT CTTCGTGCAA
CTGCCGGAGC TGCAGCAATA CGACAAAGGT GCCGAAGCCT CCACCGTCGA GTCGGTCAAA
GCCGCCAGCG GCGTGTACAT GCCCCTGAGC GGGGAAGTGG TCGCCATCAA CGACGGCCTG
AACGACAGCC CTGAGCTGGT CAACGAAGAC CCCCTGGGCG AAGGCTGGTT CTTCCGTTTC
ATTCCGGCCG ACATGAACGA AGTGGCTGCC CTGCTCGACC AGGACGCCTA CGACCGCCTG
ATCAAAGCCA ACGACGACGC CTGA
 
Protein sequence
MSELRFTEDH EWLRVEADGS VTVGITAYAQ NALGDVVFVQ LPELQQYDKG AEASTVESVK 
AASGVYMPLS GEVVAINDGL NDSPELVNED PLGEGWFFRF IPADMNEVAA LLDQDAYDRL
IKANDDA