| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4205 |
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| Symbol | |
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| ID | 6113174 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 4637216 |
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| End bp | 4638559 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641623999 |
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| Product | carbohydrate-selective porin OprB |
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| Protein accession | YP_001751054 |
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| Protein GI | 170723366 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3659] Carbohydrate-selective porin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACAGC GCAATCGCAT AAGGACCTTG GGCTCGCTGG CCCTGCTGGC CATGGTTGGG
AGTAGCGGGG TGCAGGCCGC CGAGGCCTTC TCCAGCGAGT CGAAATGGAT GACCGGCGAC
TGGGGCGGTA CTCGCACCGA ACTGCTGGAA AAAGGCTATG ACTTCACCCT CGACTATGTG
GGCGAGGTCG CCGGTAACCT CAATGGTGGC TACAACGACG ACAAGACCGC ACGCTACAGT
GACCAGTTCG CCCTCGGCGC GCACCTGGAC CTGCAGAAGA TCTTTGGCTG GCACGATGCC
GAATTCAAGC TGGCAATCAC CGAGCGCAGT GGCCGCAACC TCTCCAATGA CCGCATCAGC
GACCCCCGTG CCGGGCAGTT CAGTTCGGTG CAGGAGGTAT GGGGGCGCGG CCAGACTTGG
CGTCTTACCC AGATGTGGGT CAAGCAGAAG TACTTTGACG GTGCCCTGGA TGTGAAATTC
GGCCGTTTCG GCGAGGGCGA GGACTTCAAC AGCTTCCCTT GCGACTTCCA GAACCTGGCC
TTCTGCGGAT CGCAGGTGGG CAACTGGGTC GGCGGCATCT GGTACAACTG GCCGGTCAGC
CAGTGGGCGC TGCGGGTCAA GTACAACATC ACGCCAGAGT TCTTCGTGCA GGTCGGCGCG
TTCGAGCAGA ACCCCTCCAA CCTGGAAACC GGCAACGGCT TCAAGCTCAG CGGCAGCGGC
ACCAAGGGTG CGATCCTGCC GGTGGAGGCA GTCTGGTCGC CCAAAGTCAA CGGCCTGCCG
GGCGAGTACC GCCTGGGCTA TTACTACAGC ACGGCTGATG CCGAAGACGT CTACGAGGAC
GTCAATGGCA ACCCGCAAGG GATCAGCGGC GCCGGCTTCA AATCACACTC CAGCAAGCAC
GGCTGGTGGG TGGTTGCGCA GCAGCAAGTC ACCGCCCACG GCGGCGACGT CAGCCGCGGT
CTCAGCTTGT TCGCCAACTT CACCGTGCAC GACAAGGCCA CCAACGTGGT CGACAACTAC
CAGCAGGTGG GGTTGGTCTA CAAAGGTGCC TTCGATGCCC GGCCCAAGGA TGATATCGGC
TTTGGTGTCG CCCGCATTCA CGTCAACGAT GATGTGAAGA AGCGCGCCGA ACAGCTTAAC
GCCCAGAGCG GCATCAATGA CTACGACAAC CCGGGCTTCG TGCCTTTGCA GCGCACCGAG
TACAACGCCG AGCTCTATTA CGGCTTCCAT GTGACCAACT GGCTGACCGT GCGCCCGAAC
CTTCAGTACA TCAAGAGCCC GGGTGGCGTG GATGAGGTGG ACAACGCGCT GGTCGCAGGG
TTGAAGATTC AGTCGTCATT CTGA
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| Protein sequence | MEQRNRIRTL GSLALLAMVG SSGVQAAEAF SSESKWMTGD WGGTRTELLE KGYDFTLDYV
GEVAGNLNGG YNDDKTARYS DQFALGAHLD LQKIFGWHDA EFKLAITERS GRNLSNDRIS
DPRAGQFSSV QEVWGRGQTW RLTQMWVKQK YFDGALDVKF GRFGEGEDFN SFPCDFQNLA
FCGSQVGNWV GGIWYNWPVS QWALRVKYNI TPEFFVQVGA FEQNPSNLET GNGFKLSGSG
TKGAILPVEA VWSPKVNGLP GEYRLGYYYS TADAEDVYED VNGNPQGISG AGFKSHSSKH
GWWVVAQQQV TAHGGDVSRG LSLFANFTVH DKATNVVDNY QQVGLVYKGA FDARPKDDIG
FGVARIHVND DVKKRAEQLN AQSGINDYDN PGFVPLQRTE YNAELYYGFH VTNWLTVRPN
LQYIKSPGGV DEVDNALVAG LKIQSSF
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