Gene PputW619_4170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_4170 
Symbol 
ID6113139 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp4594970 
End bp4599496 
Gene Length4527 bp 
Protein Length1508 aa 
Translation table11 
GC content64% 
IMG OID641623964 
Productfilamentous haemagglutinin outer membrane protein 
Protein accessionYP_001751019 
Protein GI170723331 
COG category 
COG ID 
TIGRFAM ID[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR01901] filamentous haemagglutinin family N-terminal domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0207391 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGACAC TCTCGCAGAT ACCCGCTATC CGCCCCGATA CCTTGCGCTG GGCCATTTTC 
CTCGCCCTGC TCGCCTCCAC CAGCGCGCTG GCCGAACACG GCCTGGAGGC GGCCACCGGC
CCTGGGGGTA CGCCGCTCAT CAACAACAAG CATGGCGTAC CTGTTATCGA CATCGTCGCG
CCCAACGCCA GCGGCCTATC GCACAACCAG TTCCTCGACT ACAACGTCGC CCGCCCCGGC
GTGGTACTGA ACAACGCTCT CCAGGCCGGG CAGTCGCAAC TGGCCGGCGC ACTGGCGGCC
AACCCCCAGT TCCAGGGCCA CGCGGCCTCG ACCATCCTCA ACGAGGTGAT CAGCCGCAAC
GCCTCGCTGA TCGAAGGCCC ACAGGAGATC TTCGGCCGCC CGGCCGACTA CATCCTGGCC
AACCCGAACG GCATCACCCT CAATGGCGGG AGCTTCATCA ACACCACCCG TGCCGGTTTC
CTGGTCGGTA CACCGGAGCT GCAGGACGAA CAGCTCAAAC ACCTCAACAC CCTCAATGCC
AGTGGCACCC TGCAAGTGCT CACAGGCGGC CAGCACAATG CCGAGGGCGC GCTGGACCTG
ATCGCGCCGA AGCTCGACAG CAAGGGCGTG CTGTCGGCCA GTGGCGATCT CACTGTGGCC
GTTGGCCGCA ACCGCATGCG TCACGACGAC GGGCAGGTCA TCGAGCATCT GCCGGGCACA
CCGTCCAGCA TCGACGCCAA CCTGTTCGGC GCCATGCGCG CAGGGCGCAT TCGTGTGGTC
AGCACTGCCG AGGGTGCGGG GGTGCGGGTG GGGCCGGTGC AGATCAAGGC CGACCAAGGC
ATCACCCTTC AATCTGCCGG CGCACTGCAG GTCAGCGGCC ATGCAGACCT GCCTGGTGAA
CTGATCACCG ACCACGGCGC ATTGCAACTC ACTGCTGCCG ATGACCTGCG CCTTGGCGCC
GTCGATGGCA AAGCCGAACG TATCGAAATA AAGGCCGGCA AGAAGCTCAC CCTGGACGCT
GAAAGCCGCC AGAACATCGC CCGCGAGCAG GAGAGCTGGA ACAAAAAGTT CCTGTTCGTC
ACCCGCGAGA CCTACCAGCG CGAACGTACC GCCACCGACC TCAACTTGCG CGGTACGCAG
CTGCAAGCCA GTGACAGCGT GCTGTTGCAG TCCGGCGCCG ACATGCACCT GTTAGCAGCC
AATGTGGATG CGGGCGGCGA CCTGACACTC AACAGCGCTG CCAACCTGGA TATCAGTGCA
GGCACCAACA GCCAACGTAT CGAGGAGCAG GTACGCCACC GCAAAGACCT GTGGCGAGGC
GACAGTGATA CCAACCAGTA CAAGGAATCG GCACAAGGCA GCACGCTCAA TGCCGCGCGC
ATGACGGTCA AGGCCAATGA CAGGCTCACC GTGCAAGGCA GCAAGCTGCA CAGCCGCGCC
GGCCTGGACA TCAACGCCAG GAACGTCGAA ATCGGCACAA CGGCGCTGCA GGAACAGGGC
ACACGCCGCA ACTACCGTGG CGACCTGGTA TCGGGCACCT TCTTTGGTGA CCGCAAAGGC
AACGAAACCC AAGGACAACG CGTAGCCGGC AGCGCCGTCA CAGCCGATGG CAAGCTGAAC
GTTGCGGCCG AACAGTTGAG CATCAAGGGC AGCACCGTCC ACGGCGCCCA AGACGCGGTG
TTGTACAGCG AAAAAGGCGC CCTGGCGATC GAGGCTGACC ACGGCAACAC TATTGCCACC
GAGCGCGACA GCAGCAGCAA GCTGTTCGGC CTCTTCGGCA ACGATCGCGA GGGCACGCAA
CGCAAGCAGC AAGTGCTGAG CAGTGACGTC AGCTCTGCCA GCAACCTGCG GCTGGCCAGT
GCTGAAGAAT TGCGTATCCA GGGTTCGAAG GTGACGGCCG GCGGGCATCT GCAGGTCGAG
GCCAAGGGTG ACTTGTTGAT CGGTAGCACG CAGTCAAGCG ATGAAAGCGA AACACGCAGC
CAGCAGCGCG GTTTCACGGC CAGCGCCAAA CAGACCCAAG AAGCCGAAGA CGGCAAGCCC
GAGTCGCGCC AGTACGCCGC CGGCGTTGCT TACGAGGTGG TCACCAGCAC AGGCCAACAA
CGCGAAACGT CGCAGGTGGC CAGCGAATTG AAGGGCGCTA CGGTTGGCCT GAACAGCGGC
GCGCAGCTTC AAGTCAACGG CTCCAGCGTA CAGGCCAGTG CAGGCGACCT GGACGTGCAG
GGCAAACAGG TGAGCCTTGG CGACACACGC AACGAGCGCG TGTCATCCAG CAGCTCTACC
CACAGCGGCG GTGGCCTGAC GGTGACCGGC GGTATGGATC GGCTGGGCAG CCTGTTCGAA
GGCCATCACA ACAACGAAGT CATCACCGAA CGCGACAGCA AAACGCAACG CACCGGGTTG
CAGGCCAGCG GCGACCTGAA GATCAGCGCC GACGAGTTGA TCACCGAAGC TGCACGCGTC
AACGCAGGCA ACACCCTTCA GGTCACTGCC AAGCGCATCG AGAACCGTGC CGTGCAGGAC
ACCCATGAAC GTGAAGTGCA GCGCAATGAC TGGTCCGGCA GCATCGGCGC CAGCCTGGAG
TACCGTGACG TGACCCGGCC GATCGAACGC TTGGTACAGG GCGAAGAAGC GGCCCGCTTC
CAGCAAGCCT CGCCCGAAGA CGCACTGGTG GCACCGAGCG TTGGCGGCGA CATGACCCTC
GACCACCTCA AGCGCTTGGA AAACCAGCGC CGCGGCTTTG CCCAGGTGAG CGAACTGGCA
GGGGGGCTCG TGAAGGTCAA GGCCGATACC CTCGATGACC AAGGCACCGC CTGGCGTGCC
AACGCCGGCG CCCTGCAGGT CAACGCGCAG CAGCACCACC TGCGCGCCGC CGAAAACACA
CGGGAAGATA GCCTGCAGCG CCTGGCCTAC GGTGGTGACC TGCGCGTGGA TACCAGTTCG
GGGAGCGACC TGAACGTCCG CGCTTCCGGC AAGGGCGGCT CGCAAGACAA ACAGGAGGCC
GCCAGCATTG CAGTGCCAGG CAGCCTGTAC GGGCAACAGG GTATCCAGGT CCAGTTGGGC
AGCGATGGCC ACTACGAAGG CACGCACATC GATGGCGGTG AAGGCGATGT GCTGATCCAC
AGTGCCGGTA CGCTGTCACT GACCCAGGCC ACCGACCACA ACCAACAGCG CGCACGCCAG
CTCGATGGCA ACGCCTGGGC CAAGGTCGGC AACCGCCCGG GCAGCACTGG CGTCGACGCC
CGAGGCTATC TCGACCATGC CCAGCAACAG GCTACGCAAA CCAATGCCCA GGTGGCGCAG
ATCGACGCCA AAGGTGAAGT GCGCCTGACC AGCGGGGGCG ACATGCTGCT CGAAGGCACG
CGTATTGGCA GCCGCGAGGC CAAGGTTGGC GATACGCTCC TGCAAAGCGA TGGCCGCCTG
CAGGTCAAAG CTGCGAGCAA TACCCGGCAG GACACTGGCG GGAACCAGGG TGGCGGCCTG
GAGCTGGCCG TGAAGACCGG CACCACCCAA GGTGGCGCCA TCGGGGGCCA TTTCAACCAT
GGCAAGAAGA ACGAGGATGC CCGCCAGGCC ATCGATGCGC AGTTCCAAAG CGCGGGCAAA
TTGACCCTCG ACAGCGGCAC CCGCGAGGAT ATCGCCGTGC ATCTGCAGGG CCTGCAGGCA
TCGGCCGAAC ACATCGGCAT CAATGCCGCC AAGGGCGGCG TGCTGATCGA AGCGTCATCC
AATGTCGAGC GGCGCGACAA CTTGGGCATT ACCGCCGGCG CCGGCTTCAA CACATCCAAG
GGCGGCACCG ACACCCTGGG GCTGCACGGC CGTGCCCAGG TCAATCTCGA CAAGCGCGAC
AACCTCATCT GGAACGCCGG CAACCTGCGC GCCGAAGGTA TCGACCTGAA AAGCCGCGGC
GACACCCGCA TCGAAGGCGT GAGCCTGGAG GCCGGGCACA TCAACGGCGC AATCGACGGC
GATCTGCACA TCACCAGCCG CAAGGACACC GTCGATACCC TGACCGTAAA AGGTGATGCA
CGGCTGAGCA AAGAGAAAAA CCCGCAAGGC TATGTGAACG CTGCCACGGC CGTCGCGGGG
CCGCTGGGAA GCAAGGTCAG CGAAAAAGCA GGTTCCGCCC TGGCCAAGGC CGACCCGGGC
GTTTCGCCAA CCTTCAGCCT CGATGTGTCG CATGTTCAGC GTGATGGCGT AGCCCGGCAG
ACGACGCTCA AGGGCAGCGA TGGGGTAGAC CTGACGGTTG GCGGTGACGC TCACCTGACG
GGCGCCCGCC TGCAATCGGC CAAGGGTGAG GTAAAACTCA CCGCCAACGC GGTGACCAAG
GAAACGCTGA GCGGTAATGA TTACCGCCGG GATGTGTCGA TCGATGCGTC GAATTCGCCG
GTAGACCTGG GTACCGCCAT CGCCCAGATC AGCAAAGGCA AAGGTGCCGC AGACGGCGAG
AATGCACTGG ACCTTGGCTT ACTACGCACC AGTGGGCATA GCCGAAGTGA GCAGTGGGCA
TCGGGGGTTG AAGGGAAAGT CAACTGA
 
Protein sequence
MQTLSQIPAI RPDTLRWAIF LALLASTSAL AEHGLEAATG PGGTPLINNK HGVPVIDIVA 
PNASGLSHNQ FLDYNVARPG VVLNNALQAG QSQLAGALAA NPQFQGHAAS TILNEVISRN
ASLIEGPQEI FGRPADYILA NPNGITLNGG SFINTTRAGF LVGTPELQDE QLKHLNTLNA
SGTLQVLTGG QHNAEGALDL IAPKLDSKGV LSASGDLTVA VGRNRMRHDD GQVIEHLPGT
PSSIDANLFG AMRAGRIRVV STAEGAGVRV GPVQIKADQG ITLQSAGALQ VSGHADLPGE
LITDHGALQL TAADDLRLGA VDGKAERIEI KAGKKLTLDA ESRQNIAREQ ESWNKKFLFV
TRETYQRERT ATDLNLRGTQ LQASDSVLLQ SGADMHLLAA NVDAGGDLTL NSAANLDISA
GTNSQRIEEQ VRHRKDLWRG DSDTNQYKES AQGSTLNAAR MTVKANDRLT VQGSKLHSRA
GLDINARNVE IGTTALQEQG TRRNYRGDLV SGTFFGDRKG NETQGQRVAG SAVTADGKLN
VAAEQLSIKG STVHGAQDAV LYSEKGALAI EADHGNTIAT ERDSSSKLFG LFGNDREGTQ
RKQQVLSSDV SSASNLRLAS AEELRIQGSK VTAGGHLQVE AKGDLLIGST QSSDESETRS
QQRGFTASAK QTQEAEDGKP ESRQYAAGVA YEVVTSTGQQ RETSQVASEL KGATVGLNSG
AQLQVNGSSV QASAGDLDVQ GKQVSLGDTR NERVSSSSST HSGGGLTVTG GMDRLGSLFE
GHHNNEVITE RDSKTQRTGL QASGDLKISA DELITEAARV NAGNTLQVTA KRIENRAVQD
THEREVQRND WSGSIGASLE YRDVTRPIER LVQGEEAARF QQASPEDALV APSVGGDMTL
DHLKRLENQR RGFAQVSELA GGLVKVKADT LDDQGTAWRA NAGALQVNAQ QHHLRAAENT
REDSLQRLAY GGDLRVDTSS GSDLNVRASG KGGSQDKQEA ASIAVPGSLY GQQGIQVQLG
SDGHYEGTHI DGGEGDVLIH SAGTLSLTQA TDHNQQRARQ LDGNAWAKVG NRPGSTGVDA
RGYLDHAQQQ ATQTNAQVAQ IDAKGEVRLT SGGDMLLEGT RIGSREAKVG DTLLQSDGRL
QVKAASNTRQ DTGGNQGGGL ELAVKTGTTQ GGAIGGHFNH GKKNEDARQA IDAQFQSAGK
LTLDSGTRED IAVHLQGLQA SAEHIGINAA KGGVLIEASS NVERRDNLGI TAGAGFNTSK
GGTDTLGLHG RAQVNLDKRD NLIWNAGNLR AEGIDLKSRG DTRIEGVSLE AGHINGAIDG
DLHITSRKDT VDTLTVKGDA RLSKEKNPQG YVNAATAVAG PLGSKVSEKA GSALAKADPG
VSPTFSLDVS HVQRDGVARQ TTLKGSDGVD LTVGGDAHLT GARLQSAKGE VKLTANAVTK
ETLSGNDYRR DVSIDASNSP VDLGTAIAQI SKGKGAADGE NALDLGLLRT SGHSRSEQWA
SGVEGKVN