Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_4170 |
Symbol | |
ID | 6113139 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 4594970 |
End bp | 4599496 |
Gene Length | 4527 bp |
Protein Length | 1508 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641623964 |
Product | filamentous haemagglutinin outer membrane protein |
Protein accession | YP_001751019 |
Protein GI | 170723331 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type [TIGR01901] filamentous haemagglutinin family N-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0207391 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGACAC TCTCGCAGAT ACCCGCTATC CGCCCCGATA CCTTGCGCTG GGCCATTTTC CTCGCCCTGC TCGCCTCCAC CAGCGCGCTG GCCGAACACG GCCTGGAGGC GGCCACCGGC CCTGGGGGTA CGCCGCTCAT CAACAACAAG CATGGCGTAC CTGTTATCGA CATCGTCGCG CCCAACGCCA GCGGCCTATC GCACAACCAG TTCCTCGACT ACAACGTCGC CCGCCCCGGC GTGGTACTGA ACAACGCTCT CCAGGCCGGG CAGTCGCAAC TGGCCGGCGC ACTGGCGGCC AACCCCCAGT TCCAGGGCCA CGCGGCCTCG ACCATCCTCA ACGAGGTGAT CAGCCGCAAC GCCTCGCTGA TCGAAGGCCC ACAGGAGATC TTCGGCCGCC CGGCCGACTA CATCCTGGCC AACCCGAACG GCATCACCCT CAATGGCGGG AGCTTCATCA ACACCACCCG TGCCGGTTTC CTGGTCGGTA CACCGGAGCT GCAGGACGAA CAGCTCAAAC ACCTCAACAC CCTCAATGCC AGTGGCACCC TGCAAGTGCT CACAGGCGGC CAGCACAATG CCGAGGGCGC GCTGGACCTG ATCGCGCCGA AGCTCGACAG CAAGGGCGTG CTGTCGGCCA GTGGCGATCT CACTGTGGCC GTTGGCCGCA ACCGCATGCG TCACGACGAC GGGCAGGTCA TCGAGCATCT GCCGGGCACA CCGTCCAGCA TCGACGCCAA CCTGTTCGGC GCCATGCGCG CAGGGCGCAT TCGTGTGGTC AGCACTGCCG AGGGTGCGGG GGTGCGGGTG GGGCCGGTGC AGATCAAGGC CGACCAAGGC ATCACCCTTC AATCTGCCGG CGCACTGCAG GTCAGCGGCC ATGCAGACCT GCCTGGTGAA CTGATCACCG ACCACGGCGC ATTGCAACTC ACTGCTGCCG ATGACCTGCG CCTTGGCGCC GTCGATGGCA AAGCCGAACG TATCGAAATA AAGGCCGGCA AGAAGCTCAC CCTGGACGCT GAAAGCCGCC AGAACATCGC CCGCGAGCAG GAGAGCTGGA ACAAAAAGTT CCTGTTCGTC ACCCGCGAGA CCTACCAGCG CGAACGTACC GCCACCGACC TCAACTTGCG CGGTACGCAG CTGCAAGCCA GTGACAGCGT GCTGTTGCAG TCCGGCGCCG ACATGCACCT GTTAGCAGCC AATGTGGATG CGGGCGGCGA CCTGACACTC AACAGCGCTG CCAACCTGGA TATCAGTGCA GGCACCAACA GCCAACGTAT CGAGGAGCAG GTACGCCACC GCAAAGACCT GTGGCGAGGC GACAGTGATA CCAACCAGTA CAAGGAATCG GCACAAGGCA GCACGCTCAA TGCCGCGCGC ATGACGGTCA AGGCCAATGA CAGGCTCACC GTGCAAGGCA GCAAGCTGCA CAGCCGCGCC GGCCTGGACA TCAACGCCAG GAACGTCGAA ATCGGCACAA CGGCGCTGCA GGAACAGGGC ACACGCCGCA ACTACCGTGG CGACCTGGTA TCGGGCACCT TCTTTGGTGA CCGCAAAGGC AACGAAACCC AAGGACAACG CGTAGCCGGC AGCGCCGTCA CAGCCGATGG CAAGCTGAAC GTTGCGGCCG AACAGTTGAG CATCAAGGGC AGCACCGTCC ACGGCGCCCA AGACGCGGTG TTGTACAGCG AAAAAGGCGC CCTGGCGATC GAGGCTGACC ACGGCAACAC TATTGCCACC GAGCGCGACA GCAGCAGCAA GCTGTTCGGC CTCTTCGGCA ACGATCGCGA GGGCACGCAA CGCAAGCAGC AAGTGCTGAG CAGTGACGTC AGCTCTGCCA GCAACCTGCG GCTGGCCAGT GCTGAAGAAT TGCGTATCCA GGGTTCGAAG GTGACGGCCG GCGGGCATCT GCAGGTCGAG GCCAAGGGTG ACTTGTTGAT CGGTAGCACG CAGTCAAGCG ATGAAAGCGA AACACGCAGC CAGCAGCGCG GTTTCACGGC CAGCGCCAAA CAGACCCAAG AAGCCGAAGA CGGCAAGCCC GAGTCGCGCC AGTACGCCGC CGGCGTTGCT TACGAGGTGG TCACCAGCAC AGGCCAACAA CGCGAAACGT CGCAGGTGGC CAGCGAATTG AAGGGCGCTA CGGTTGGCCT GAACAGCGGC GCGCAGCTTC AAGTCAACGG CTCCAGCGTA CAGGCCAGTG CAGGCGACCT GGACGTGCAG GGCAAACAGG TGAGCCTTGG CGACACACGC AACGAGCGCG TGTCATCCAG CAGCTCTACC CACAGCGGCG GTGGCCTGAC GGTGACCGGC GGTATGGATC GGCTGGGCAG CCTGTTCGAA GGCCATCACA ACAACGAAGT CATCACCGAA CGCGACAGCA AAACGCAACG CACCGGGTTG CAGGCCAGCG GCGACCTGAA GATCAGCGCC GACGAGTTGA TCACCGAAGC TGCACGCGTC AACGCAGGCA ACACCCTTCA GGTCACTGCC AAGCGCATCG AGAACCGTGC CGTGCAGGAC ACCCATGAAC GTGAAGTGCA GCGCAATGAC TGGTCCGGCA GCATCGGCGC CAGCCTGGAG TACCGTGACG TGACCCGGCC GATCGAACGC TTGGTACAGG GCGAAGAAGC GGCCCGCTTC CAGCAAGCCT CGCCCGAAGA CGCACTGGTG GCACCGAGCG TTGGCGGCGA CATGACCCTC GACCACCTCA AGCGCTTGGA AAACCAGCGC CGCGGCTTTG CCCAGGTGAG CGAACTGGCA GGGGGGCTCG TGAAGGTCAA GGCCGATACC CTCGATGACC AAGGCACCGC CTGGCGTGCC AACGCCGGCG CCCTGCAGGT CAACGCGCAG CAGCACCACC TGCGCGCCGC CGAAAACACA CGGGAAGATA GCCTGCAGCG CCTGGCCTAC GGTGGTGACC TGCGCGTGGA TACCAGTTCG GGGAGCGACC TGAACGTCCG CGCTTCCGGC AAGGGCGGCT CGCAAGACAA ACAGGAGGCC GCCAGCATTG CAGTGCCAGG CAGCCTGTAC GGGCAACAGG GTATCCAGGT CCAGTTGGGC AGCGATGGCC ACTACGAAGG CACGCACATC GATGGCGGTG AAGGCGATGT GCTGATCCAC AGTGCCGGTA CGCTGTCACT GACCCAGGCC ACCGACCACA ACCAACAGCG CGCACGCCAG CTCGATGGCA ACGCCTGGGC CAAGGTCGGC AACCGCCCGG GCAGCACTGG CGTCGACGCC CGAGGCTATC TCGACCATGC CCAGCAACAG GCTACGCAAA CCAATGCCCA GGTGGCGCAG ATCGACGCCA AAGGTGAAGT GCGCCTGACC AGCGGGGGCG ACATGCTGCT CGAAGGCACG CGTATTGGCA GCCGCGAGGC CAAGGTTGGC GATACGCTCC TGCAAAGCGA TGGCCGCCTG CAGGTCAAAG CTGCGAGCAA TACCCGGCAG GACACTGGCG GGAACCAGGG TGGCGGCCTG GAGCTGGCCG TGAAGACCGG CACCACCCAA GGTGGCGCCA TCGGGGGCCA TTTCAACCAT GGCAAGAAGA ACGAGGATGC CCGCCAGGCC ATCGATGCGC AGTTCCAAAG CGCGGGCAAA TTGACCCTCG ACAGCGGCAC CCGCGAGGAT ATCGCCGTGC ATCTGCAGGG CCTGCAGGCA TCGGCCGAAC ACATCGGCAT CAATGCCGCC AAGGGCGGCG TGCTGATCGA AGCGTCATCC AATGTCGAGC GGCGCGACAA CTTGGGCATT ACCGCCGGCG CCGGCTTCAA CACATCCAAG GGCGGCACCG ACACCCTGGG GCTGCACGGC CGTGCCCAGG TCAATCTCGA CAAGCGCGAC AACCTCATCT GGAACGCCGG CAACCTGCGC GCCGAAGGTA TCGACCTGAA AAGCCGCGGC GACACCCGCA TCGAAGGCGT GAGCCTGGAG GCCGGGCACA TCAACGGCGC AATCGACGGC GATCTGCACA TCACCAGCCG CAAGGACACC GTCGATACCC TGACCGTAAA AGGTGATGCA CGGCTGAGCA AAGAGAAAAA CCCGCAAGGC TATGTGAACG CTGCCACGGC CGTCGCGGGG CCGCTGGGAA GCAAGGTCAG CGAAAAAGCA GGTTCCGCCC TGGCCAAGGC CGACCCGGGC GTTTCGCCAA CCTTCAGCCT CGATGTGTCG CATGTTCAGC GTGATGGCGT AGCCCGGCAG ACGACGCTCA AGGGCAGCGA TGGGGTAGAC CTGACGGTTG GCGGTGACGC TCACCTGACG GGCGCCCGCC TGCAATCGGC CAAGGGTGAG GTAAAACTCA CCGCCAACGC GGTGACCAAG GAAACGCTGA GCGGTAATGA TTACCGCCGG GATGTGTCGA TCGATGCGTC GAATTCGCCG GTAGACCTGG GTACCGCCAT CGCCCAGATC AGCAAAGGCA AAGGTGCCGC AGACGGCGAG AATGCACTGG ACCTTGGCTT ACTACGCACC AGTGGGCATA GCCGAAGTGA GCAGTGGGCA TCGGGGGTTG AAGGGAAAGT CAACTGA
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Protein sequence | MQTLSQIPAI RPDTLRWAIF LALLASTSAL AEHGLEAATG PGGTPLINNK HGVPVIDIVA PNASGLSHNQ FLDYNVARPG VVLNNALQAG QSQLAGALAA NPQFQGHAAS TILNEVISRN ASLIEGPQEI FGRPADYILA NPNGITLNGG SFINTTRAGF LVGTPELQDE QLKHLNTLNA SGTLQVLTGG QHNAEGALDL IAPKLDSKGV LSASGDLTVA VGRNRMRHDD GQVIEHLPGT PSSIDANLFG AMRAGRIRVV STAEGAGVRV GPVQIKADQG ITLQSAGALQ VSGHADLPGE LITDHGALQL TAADDLRLGA VDGKAERIEI KAGKKLTLDA ESRQNIAREQ ESWNKKFLFV TRETYQRERT ATDLNLRGTQ LQASDSVLLQ SGADMHLLAA NVDAGGDLTL NSAANLDISA GTNSQRIEEQ VRHRKDLWRG DSDTNQYKES AQGSTLNAAR MTVKANDRLT VQGSKLHSRA GLDINARNVE IGTTALQEQG TRRNYRGDLV SGTFFGDRKG NETQGQRVAG SAVTADGKLN VAAEQLSIKG STVHGAQDAV LYSEKGALAI EADHGNTIAT ERDSSSKLFG LFGNDREGTQ RKQQVLSSDV SSASNLRLAS AEELRIQGSK VTAGGHLQVE AKGDLLIGST QSSDESETRS QQRGFTASAK QTQEAEDGKP ESRQYAAGVA YEVVTSTGQQ RETSQVASEL KGATVGLNSG AQLQVNGSSV QASAGDLDVQ GKQVSLGDTR NERVSSSSST HSGGGLTVTG GMDRLGSLFE GHHNNEVITE RDSKTQRTGL QASGDLKISA DELITEAARV NAGNTLQVTA KRIENRAVQD THEREVQRND WSGSIGASLE YRDVTRPIER LVQGEEAARF QQASPEDALV APSVGGDMTL DHLKRLENQR RGFAQVSELA GGLVKVKADT LDDQGTAWRA NAGALQVNAQ QHHLRAAENT REDSLQRLAY GGDLRVDTSS GSDLNVRASG KGGSQDKQEA ASIAVPGSLY GQQGIQVQLG SDGHYEGTHI DGGEGDVLIH SAGTLSLTQA TDHNQQRARQ LDGNAWAKVG NRPGSTGVDA RGYLDHAQQQ ATQTNAQVAQ IDAKGEVRLT SGGDMLLEGT RIGSREAKVG DTLLQSDGRL QVKAASNTRQ DTGGNQGGGL ELAVKTGTTQ GGAIGGHFNH GKKNEDARQA IDAQFQSAGK LTLDSGTRED IAVHLQGLQA SAEHIGINAA KGGVLIEASS NVERRDNLGI TAGAGFNTSK GGTDTLGLHG RAQVNLDKRD NLIWNAGNLR AEGIDLKSRG DTRIEGVSLE AGHINGAIDG DLHITSRKDT VDTLTVKGDA RLSKEKNPQG YVNAATAVAG PLGSKVSEKA GSALAKADPG VSPTFSLDVS HVQRDGVARQ TTLKGSDGVD LTVGGDAHLT GARLQSAKGE VKLTANAVTK ETLSGNDYRR DVSIDASNSP VDLGTAIAQI SKGKGAADGE NALDLGLLRT SGHSRSEQWA SGVEGKVN
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