| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4158 |
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| Symbol | |
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| ID | 6113127 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 4583353 |
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| End bp | 4584729 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641623952 |
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| Product | signal recognition particle protein |
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| Protein accession | YP_001751007 |
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| Protein GI | 170723319 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0541] Signal recognition particle GTPase |
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| TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.23319 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.485937 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGAAA ACCTGACCGA CCGCCTGTCA CAGACGCTGC GCCATGTCAC CGGCAAGGCC
AAGCTGACTG AAGACAACAT CAAGGATACG TTGCGCGAAG TGCGCATGGC CCTGCTCGAG
GCCGACGTTG CCCTGCCGGT GGTCAAGGAT TTCGTCAACA GCGTCAAGGA GCGTGCGGTC
GGCACCGAGG TGTCGCGCAG CCTGACCCCG GGCCAGGCGT TCGTGAAGAT CGTCCAGGCC
GAGCTGGAAA GCCTGATGGG CGCGGCCAAC GAAGACCTCG CGCTCAATGC CGCCCCGCCT
GCCGTGGTGC TGATGGCCGG TTTGCAGGGC GCGGGCAAGA CCACCACCGC CGGCAAGCTC
GCGCGCTTCC TCAAGGAGCG CAAGAAGAAG AGCGTGATGG TGGTTTCGGC CGACGTTTAC
CGCCCGGCAG CGATCAAACA GCTGGAAACG CTGGCCAACG ACATCGGTGT GACCTTCTTC
CCGTCCGATA TCAGCCAGAA GCCTGTGGCC ATTGCCGAAG CGGCGATCCG CGAAGCCAAG
CTCAAGTTCA TCGACGTGGT CATTGTCGAT ACCGCCGGCC GTCTGCACAT CGACGCCGAC
ATGATGGACG AGATCAAAGC GCTGCATGCT GCGGTCAAGC CGGTCGAAAC CCTGTTCGTG
GTCGATGCCA TGACCGGCCA GGATGCCGCC AATACCGCCA AGGCCTTCGG TGAAGCCCTG
CCGCTTACCG GCGTGGTGCT GACCAAGGTC GACGGTGATG CCCGTGGCGG TGCCGCGCTT
TCGGTACGTG CCATCACCGG CAAGCCGATC AAGTTCATCG GTATGGGTGA GAAAACCGAG
GCCCTTGAGC CTTTCCACCC GGACCGTGTG GCGTCGCGCA TCCTCGGCAT GGGCGACGTG
CTCAGCCTGA TCGAGCAGGC CGAGCAGACC ATCGACAAGG CCAAGGCCGA CAAGCTGGCC
AAGAAGCTCA AGAAGGGCAA GGGCTTCGAT CTCGAAGACT TCCGCGATCA GCTGCAGCAG
ATGAAGAACA TGGGTGGCCT GGGCGGCCTG ATGGACAAAC TGCCCAGCAT CGGCGGGGTA
AATCTGTCGC AGATGGGCAA TGCTCAGGGC GCGGCAGAGA AGCAGTTCAA GCAGATGGAG
GCGATCATCA ACTCCATGAC CCCGGCCGAG CGTCGCGATC CTGACCTGAT CAGCGGTTCG
CGCAAGCGCC GGATCGCCCT GGGTTCCGGT ACCCAGGTGC AGGACATCGG GCGGCTGATC
AAGCAGCACA AGCAGATGCA GAAGATGATG AAGAAATTCT CCTCCAAGGG CGGCATGGCC
AAGATGATGC GCGGCCTGGG CGGGATGCTG CCTGGTGGCG GCATGCCGAA GCTGTAA
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| Protein sequence | MFENLTDRLS QTLRHVTGKA KLTEDNIKDT LREVRMALLE ADVALPVVKD FVNSVKERAV
GTEVSRSLTP GQAFVKIVQA ELESLMGAAN EDLALNAAPP AVVLMAGLQG AGKTTTAGKL
ARFLKERKKK SVMVVSADVY RPAAIKQLET LANDIGVTFF PSDISQKPVA IAEAAIREAK
LKFIDVVIVD TAGRLHIDAD MMDEIKALHA AVKPVETLFV VDAMTGQDAA NTAKAFGEAL
PLTGVVLTKV DGDARGGAAL SVRAITGKPI KFIGMGEKTE ALEPFHPDRV ASRILGMGDV
LSLIEQAEQT IDKAKADKLA KKLKKGKGFD LEDFRDQLQQ MKNMGGLGGL MDKLPSIGGV
NLSQMGNAQG AAEKQFKQME AIINSMTPAE RRDPDLISGS RKRRIALGSG TQVQDIGRLI
KQHKQMQKMM KKFSSKGGMA KMMRGLGGML PGGGMPKL
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