Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_4153 |
Symbol | |
ID | 6113122 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 4580673 |
End bp | 4581080 |
Gene Length | 408 bp |
Protein Length | 135 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641623947 |
Product | thioesterase superfamily protein |
Protein accession | YP_001751002 |
Protein GI | 170723314 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1607] Acyl-CoA hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.351728 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.558085 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTAGCC GAGATCAGGA AATTCAGCGC CGCACCGAGT TGTCGGTGAC CCGCGTGACC AAAGCGGTGT TCCCCAACAC CACCAACCAC CACAACACCT TGTTCGGCGG GACTGCGCTG GCCTGGATGG ACGAAGTGTC GTTCATCGCC GCTACGCGCT TCTGCCGGCT GCCACTGGTG ACCGTGTCCA CAGATCGTAT CGATTTCAAG CACCCGATCC CGGCAGGCTC GATCGTCGAG CTGGTGGGGA CGGTGATCAA GGTCGGCAAC ACCAGCTTGC AGGTTCAAGT GGACGTATTC GTCGAGAACA TGTACCTGGA TGGGCGCGAG CGGGCAATCC ATGGTGTGTT CAGCTTTGTC GCCATCGACG AGGACAAACG CCCGGTGCCG GTGTTGCCAC AAGCCTGA
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Protein sequence | MTSRDQEIQR RTELSVTRVT KAVFPNTTNH HNTLFGGTAL AWMDEVSFIA ATRFCRLPLV TVSTDRIDFK HPIPAGSIVE LVGTVIKVGN TSLQVQVDVF VENMYLDGRE RAIHGVFSFV AIDEDKRPVP VLPQA
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