Gene PputW619_4126 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_4126 
Symbol 
ID6113095 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp4552834 
End bp4555101 
Gene Length2268 bp 
Protein Length755 aa 
Translation table11 
GC content63% 
IMG OID641623920 
ProductCheA signal transduction histidine kinase 
Protein accessionYP_001750975 
Protein GI170723287 
COG category[T] Signal transduction mechanisms
[N] Cell motility 
COG ID[COG0643] Chemotaxis protein histidine kinase and related kinases
[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.153494 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCCTG AGCAAATGCG CGACGCATCG TTGCTCGAGC TGTTCAGCCT GGAAGCGGAA 
GCTCAGACCC AGGTGCTCAT CACAGGGCTG ATGGCGCTGG AGCGCAACCC GACCCAGGCC
GATCAGTTGG AAGCCTGCAT GCGTGCTGCG CACTCTTTGA AGGGGGCTGC ACGCATCGTT
GGCATTGACG ACGGGGTCAG CGTGGCCCAT GTGATGGAAG ATTGCCTGGT AGCGGCCCAG
GAAGGCCGAC TGCTGCTGCG CGCTGAACAT ATCGATGCCT TGCTGCGCGG TACCGACCTG
CTGCTGCATG TCGCCACGCC CGGGGACCCG GCCGGTGAGA GCGCGGTACC CGGTTTTCTG
GCCCAGATGT CTGGCCTGCT GGATCCTCCC ATTGCACCTG TGCCTTCCAG GGAGCCGGCC
CCGCAACCGT TACCTGCGGC CGACCTGATT ACCCCCGAGG TTGAGCCAGA AGCAGAGCCT
CTTGTGCCGC GCAAGGCAGG TAAACGTGGC GCGCAAGGCA GCGAGCGGGT GTTGCGGGTA
ACTGCCGATC GACTCAATAG CCTGCTCGAC TTGTCGAGCA AGTCGCTGGT CGAGACTCAG
CGCCTCAAAC CCTACCTGGC CACCCTGCAG CGCCTCAAGC GCATGCACGG CCAAGGCATG
CGCGCCCTCG ATGGCCTGAA AGCCCAATTG GAAGGCAGCG GCCAGAGCCT GCCGGTGTTG
GAAGCACTGG CCCAGACGCA ACGGCTGCTG ATGGAAACCC AGCAGATCCT GCAACAGCAG
ACTGCCGACC TCGACGAATT CGGATGGCAG GCCAGCCAGC GGGCTCAGTT GCTGTACGAC
ACGGCTCTGG CCTGCCGTAT GCGCCCGTTT GCCGATGTGC TTACCGGCCA GAGCCGTATG
GTGCGAGACC TGGGTCGCTC GCTGGGCAAG CAGGTGCGTC TGCAGATAGA CGGTGAAAAG
ACCCAGGTCG ACCGCGATGT GCTGGAAAAG CTCGAAGCGC CGTTGACCCA TCTGCTGCGC
AATGCAGTCG ACCATGGTAT TGAACTGCCT GAGCAGCGAC TGCTGGCGGG CAAACCGGAA
GAAGGTGCGA TACGCCTGCG AGCCTCCCAT CAGGCCGGCC TGTTGATCCT TGAACTGAGC
GATGACGGCG CCGGCATCGA TCTGCAACGG CTGCAGCGCA GTATCGTTCA GCGCGGCTTG
TCCCCGGCGG ATACCGTGGC GAAGATGAGC GAGGCGGAGC TGCTGACCTT CCTGTTCCTG
CCGGGCTTCA GCATGCGTGA CAAAGTGACC GAAGTCTCCG GCCGCGGTGT TGGCCTGGAC
GCTGTGCAGC ATCTGGTCCG GGACCTGCGC GGCTCGATCG AGCTGACCCA GCAGGCCGGC
CAGGGCTGCC GCTTTCACCT GGAAGTGCCG TTGACCCTTT CAGTGGTACG CAGCCTTGTG
GTGGAAGTCG GGGGGGAGGC TTATGCGTTC CCTCTGGCGC ATATCGAGCG CACCTTGGAA
GTGACTGCCG AGCAGATCGT ACAAATCGAG GGGCGTCAGC ATTTTTGGCA TGAGGGCCGG
CATATCGGTC TGGTGGCGGC CAGCCAGTTG CTCAACCGGC CCACCGCGCA AGGTGATGAA
GGCGGTTTGC GGGTCGTGGT GATCCGCGAA CGTGAACAGC TTTACGGTGT GGCCGTGGAG
CGGCTGATCG GTGAGCGGGT GCTGGTAGTG ATGCCGCTTG ATGCGCGGTT GGGCAAGGTC
CAGGACATTT CCGCGGGGGC GCTGCTGGAC GATGGCTCGG TGGTGTTGAT CGTCGATGTC
GAAGACTTGC TGCGTTCGGT CGAGAAGCTG CTCAGTACCG GCCGCCTGGA GCGCATCGAG
CGCGGCCTGC AGGCCGGCCG TGGCGTCAGC AGCAAGCGCA TCCTGGTAGT CGATGACTCG
CTCACCGTTC GCGAGCTGCA ACGCAAGCTG CTGAGCAATC GGGGGTTCGA GGTGGCGGTG
GCAGTCGATG GCATGGACGG TTGGAATGCG TTGCGTAGCG AGGATTTCGA CCTGCTGATC
ACCGACATCG ACATGCCGCG CATGGACGGT ATCGAGCTGG TTACCTTGGT ACGCCGCGAC
CAGCGCCTGC AGTCGTTGCC CGTGATGGTG GTGTCGTACA AGGACCGCGA GGAAGATCGC
CGGCGAGGCC TGGATGCTGG CGCCGACTAC TATTTGGCAA AAGCCAGCTT CCACGACGAT
GCGTTGCTCG ACGCTGTGGT TGAACTGATC GGAGGTGCTC AAGGATGA
 
Protein sequence
MTPEQMRDAS LLELFSLEAE AQTQVLITGL MALERNPTQA DQLEACMRAA HSLKGAARIV 
GIDDGVSVAH VMEDCLVAAQ EGRLLLRAEH IDALLRGTDL LLHVATPGDP AGESAVPGFL
AQMSGLLDPP IAPVPSREPA PQPLPAADLI TPEVEPEAEP LVPRKAGKRG AQGSERVLRV
TADRLNSLLD LSSKSLVETQ RLKPYLATLQ RLKRMHGQGM RALDGLKAQL EGSGQSLPVL
EALAQTQRLL METQQILQQQ TADLDEFGWQ ASQRAQLLYD TALACRMRPF ADVLTGQSRM
VRDLGRSLGK QVRLQIDGEK TQVDRDVLEK LEAPLTHLLR NAVDHGIELP EQRLLAGKPE
EGAIRLRASH QAGLLILELS DDGAGIDLQR LQRSIVQRGL SPADTVAKMS EAELLTFLFL
PGFSMRDKVT EVSGRGVGLD AVQHLVRDLR GSIELTQQAG QGCRFHLEVP LTLSVVRSLV
VEVGGEAYAF PLAHIERTLE VTAEQIVQIE GRQHFWHEGR HIGLVAASQL LNRPTAQGDE
GGLRVVVIRE REQLYGVAVE RLIGERVLVV MPLDARLGKV QDISAGALLD DGSVVLIVDV
EDLLRSVEKL LSTGRLERIE RGLQAGRGVS SKRILVVDDS LTVRELQRKL LSNRGFEVAV
AVDGMDGWNA LRSEDFDLLI TDIDMPRMDG IELVTLVRRD QRLQSLPVMV VSYKDREEDR
RRGLDAGADY YLAKASFHDD ALLDAVVELI GGAQG