Gene PputW619_4115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_4115 
Symbol 
ID6113084 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp4542597 
End bp4543385 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content62% 
IMG OID641623909 
ProductOmpA/MotB domain-containing protein 
Protein accessionYP_001750964 
Protein GI170723276 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAAAC ACGTCATGAT TCCCGCCCTG CTGGCCCTGA GCGTCGGTCT CGCTGCCTGC 
TCGCACGACC CGAACGCCAA CCTGGAGTCG GCCCGTACCA ACTTCTCGTC GCTGCAGAGC
GACCCGCAGG CGAGCAAAAT CGCAGCCCTT GAAACCAAGG ACGCACAGGA CTGGCTGAAC
AAGGCCGACA AAGCCTACAT GGAGCGTGAG GACAGCAAGA AAGTCGACCA GCTGGCCTAC
CTGACCAACC AGCGCGTTGA AGTGGCCAAG CAGACCATTG CTCTGCGCTC GGCCGAAAAC
GAGCTGAAAA ACGCCTCGGC CCAACGTGCC CAGGCCAAGC TCGATGCCCG TGACGCGCAG
ATCGCCAAGC TTCAGGACAG CCTGAACGCC AAGCAGACCG ACCGCGGTAC GTTGGTGACC
TTCGGCGATG TACTGTTCGA CTTCAACAAG GCTGAACTCA AGAGCAGCGC CTTGCCCAAC
GTCACCAAGC TGGCCCAGTT CCTTCAGGAA AACCCTGAGC GCAAGGTAAT CGTAGAGGGC
TACACCGACA GCGTCGGCTC GGCTAACTAC AACCAGTCCT TGTCCGAGCG TCGCGCCGGT
GCCGTGCGCA TGGCACTGGT ACGCGCAGGC GTGGACCCTG CGCGCATCGT CGCTCAGGGC
TACGGCAAGG AATACCCGGT TGCTGACAAC AGCAGCAACT CGGGCCGTGC GCAGAACCGC
CGGGTGGAGG TGACCATCTC CAACGACAAC CAGCCGGTAG CGCCGCGTTC GGTGAGCCAG
GTGCAGTAA
 
Protein sequence
MRKHVMIPAL LALSVGLAAC SHDPNANLES ARTNFSSLQS DPQASKIAAL ETKDAQDWLN 
KADKAYMERE DSKKVDQLAY LTNQRVEVAK QTIALRSAEN ELKNASAQRA QAKLDARDAQ
IAKLQDSLNA KQTDRGTLVT FGDVLFDFNK AELKSSALPN VTKLAQFLQE NPERKVIVEG
YTDSVGSANY NQSLSERRAG AVRMALVRAG VDPARIVAQG YGKEYPVADN SSNSGRAQNR
RVEVTISNDN QPVAPRSVSQ VQ