| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4085 |
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| Symbol | |
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| ID | 6113054 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 4510712 |
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| End bp | 4511908 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641623879 |
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| Product | succinyldiaminopimelate transaminase |
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| Protein accession | YP_001750934 |
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| Protein GI | 170723246 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | [TIGR03538] succinyldiaminopimelate transaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.930262 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCATG CCCTGACCCA GCTTCAGCCC TACCCCTTCG AGAAACTCCG CGCCCTGCTG
GGCAGCGTGA AGCCCGCGGC GGACAAGCGC GCCATCGCCC TGTCGATCGG TGAGCCGAAG
CACGCATCCC CGGCGTTCGT CGCCCAGGCC ATGGCCGACA ACCTCGACAA GCTGGCGGTC
TACCCCAGCA CCATCGGCCT GCCAGAGCTG CGCCAGGCCA TCGGCCAATG GTGCGAACGC
CGCTTCGGCG TGCCGACCGG CTGGCTGGAC GCGGACCGCC ATGTGCTGCC GGTCAACGGC
ACCCGTGAAG CGCTGTTCGC CTTCACCCAG GCTGTGGTCA ACCGCGCCGA TGATGGCCTG
GTGGTCAGCC CCAACCCGTT CTACCAGATC TACGAAGGCG CGGCCCTGCT CGCCGGCGCC
ACCCCGCATT ATCTGCCGTG CCTGGAAAAC AACGGTTTCA ACCCGGACTT CGATGCCGTA
CCCGCCGAGG TCTGGAAACG CTGCCAGATC CTGTTCCTGT GCTCACCGGG CAACCCCACC
GGCGCACTGG TACCGATGGA CACCCTGAAG AAGCTGATCG CACTGGCCGA CGAGCATGAT
TTCGTGATCG CCGCCGATGA GTGCTACAGC GAACTGTACT TCGACGAAGA CGCCCCACCA
CCGGGCCTGC TCAGTGCCTG TGCCGAACTG GGCCGCAGTG ACTTCAAGCG TTGCGTGGTA
TTCCACAGCC TGTCCAAGCG CTCCAACCTG CCGGGCCTGC GTTCGGGCTT CGTTGCCGGC
GACGCGGCCA TCATCAAGCC GTTCCTGCTG TACCGCACCT ACCATGGCTG CGCCATGCCG
GTGCAGACCC AGCTGGCCAG CATCGCCGCC TGGCAGGATG AAGCACATGT GCGCGAAAAC
CGCGACCTAT ACCGCGCCAA ATACGATGCC GTGCTGGATA TCCTGCAGCC CGTGCTGGAC
GTACAGCGGC CTGATGGCAG TTTCTACCTG TGGGCCAAGG TACCGGGGTG CGATGCCGAC
TTCACGCGTG ACCTGTTCGA AGCCCAGCAT GTGACGGTGG TACCTGGTTC GTACCTGTCG
CGCGAAGTGG ATGGCGTGAA TCCGGGGGCC GGGCGGGTAC GCATGGCACT GGTCGCACCA
TTGGCCGAGT GCATAGAGGC GGCTGAGCGG ATTCGTGCGT TTGTGCAAAA CCGTTGA
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| Protein sequence | MNHALTQLQP YPFEKLRALL GSVKPAADKR AIALSIGEPK HASPAFVAQA MADNLDKLAV
YPSTIGLPEL RQAIGQWCER RFGVPTGWLD ADRHVLPVNG TREALFAFTQ AVVNRADDGL
VVSPNPFYQI YEGAALLAGA TPHYLPCLEN NGFNPDFDAV PAEVWKRCQI LFLCSPGNPT
GALVPMDTLK KLIALADEHD FVIAADECYS ELYFDEDAPP PGLLSACAEL GRSDFKRCVV
FHSLSKRSNL PGLRSGFVAG DAAIIKPFLL YRTYHGCAMP VQTQLASIAA WQDEAHVREN
RDLYRAKYDA VLDILQPVLD VQRPDGSFYL WAKVPGCDAD FTRDLFEAQH VTVVPGSYLS
REVDGVNPGA GRVRMALVAP LAECIEAAER IRAFVQNR
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