| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4084 |
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| Symbol | glnD |
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| ID | 6113053 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 4507979 |
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| End bp | 4510681 |
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| Gene Length | 2703 bp |
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| Protein Length | 900 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641623878 |
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| Product | PII uridylyl-transferase |
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| Protein accession | YP_001750933 |
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| Protein GI | 170723245 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG2844] UTP:GlnB (protein PII) uridylyltransferase |
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| TIGRFAM ID | [TIGR01693] [Protein-PII] uridylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.822232 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCAGG TGGATCCCGA GCTGTTCGAC CGCGGCCAGT TCCAGGCGGA ACTGGCCCTC
AAGGCGAGCC CCATCGCCGC TTTCAAGAAG GCCATCCGCC AGGCCGGCGA GGTGCTCGAC
AGGCGTTTCC GTGACGGCCG CGACATCCGT CGGCTGATCG AGGACCGCGC CTGGCTAGTC
GACAACATCC TGCAACAGGC CTGGAAACAG TTCGACTGGG GCGACGCTGA CGGCATAGCC
CTGGTAGCGG TCGGGGGCTA TGGGCGCGGT GAACTGCACC CGCACTCGGA CATCGACCTG
CTGATCCTGC TGCGCGACGC CGAACACGAG CAGTACCGCG ACGCCATCGA GCGCTTCCTG
ACACTGCTGT GGGACATTGG CCTTGAAGTG GGCCAGAGCG TGCGTACCGT CGACGAGTGC
GCCGAACAGG CCCGCGCCGA CCTTACGGTC ATCACCAACA TGATGGAAAG CCGCACCATC
GCCGGCCGCG AAGCCCTGCG CCAGCGCATG CTCGAAGTCA CCAGCACCGC GCACATGTGG
CCGAGCAAGG AGTTCTTCCT GGCCAAGCGC GCAGAGCTCA AGGCCCGCCA CCACAAGTAC
AACGACACCG AGTACAACCT CGAGCCCAAT GTAAAAGGCT CGCCCGGTGG CCTTCGCGAC
ATCCAGACAG TCCTTTGGGT AGCCCGTCGC CAGTACGGCA CCCTGAACCT GCACGCCCTC
GCTGGCGAAG GCTTCCTGCT GGAAAGCGAA AACGAACTGC TGGCCTCCTC CCAGGACTTT
TTGTGGAAGG TGCGCTACGC CCTGCACATG CTCGCCGGCC GCGCCGAAGA TCGCCTGCTG
TTCGACCACC AGCGCAGCAT CGCCGCACTG CTGGGCTACA GCGACGAAAA CCCCAAACGC
GCCATCGAAC AGTTCATGCA GCAGTACTAC CGGGTGGTGA TGAGCATCAG CCAGTTGTGC
GACCTGATCA TCCAGCACTT CGAGGAAGTC ATCCTAGCCG ACGATGACAG TGGTACCACC
CAGCCGCTGA ATGCGCGCTT CCGGCTGCAC GACGGCTATA TCGAGGCCGT CAACGCGAAC
GTTTTCAAGC GCACGCCGTT CGCCATGCTG GAGATCTTCG TGCTGATGGC GCAGCACCCG
GAAATCAAGG GCGTGCGCGC GGACACCGTG CGCCTGCTGC GCGAGCACCG GCACCTGATC
GACGACACCT TCCGCAACGA TATTCGCAAC ACCAGCCTGT TCATCGAGCT GTTCAAGTGC
GAAATCGGCA TCCATCGCAA CCTGCGGCGG ATGAACCGTT ACGGCATCCT CGGCCGCTAC
CTGCCAGAGT TCGGCCTGAT CGTCGGGCAG ATGCAGCACG ACCTGTTCCA CATTTATACG
GTCGATGCGC ACACCCTCAA CCTCATCAAG CACCTGCGCA AGCTGCAGTA CACGCCGGTG
TCCGAAAAAT TCCCGCTGGC CAGCAAGCTT ATGGGCCGCC TGCCCAAGCC TGAGCTCATC
TACCTGGCCG GGCTGTACCA CGACATCGGC AAAGGCCGTC AGGGCGACCA CTCCGAGCTG
GGCGCTGTGG ACGCGAAGAA GTTCTGCGAG CGCCATCAAT TGCCCGCCTG GGACAGCCGC
CTGATCGTCT GGCTGGTGCA AAACCACCTG GTGATGTCCA CCACCGCCCA GCGCAAGGAC
CTGTCCGACC CGCAGGTGAT CAACGACTTC GCCCTGCATG TCGGCGACGA GACGCGCCTG
GACTACCTCT ACGTGCTGAC CGTGGCCGAC ATCAACGCCA CCAATCCCAG CCTGTGGAAC
TCCTGGCGAG CCAGCCTGCT GCGCCAGCTG TACAGCGAGA CCAAACGCGC CTTGCGTCGC
GGCCTGGAAA ACCCGCTGGA CCGCGAGGAG CAGATCCGCC AGACACAGAG TGCTGCGCTG
GATATCCTCG TACGCGAGGG CACCGACCCG GACGACGTCG AGCAACTCTG GTCGCAACTG
GGTGACGACT ACTTCCTCAA GCACAACGCC GCCGATGTGG CCTGGCACAG TGACGCGATC
CTGCAGCAGC CCGCCGACGG CGGGCCGCTG GTACTGATCA AGGAAACCAC ACAGCGGGAG
TTCGAGGGCG GCACGCAGAT CTTCATCTAC GCCCCCGACC AGCACGATTT CTTCGCTGTG
ACCGTGGCGG CCATGTCGCA GCTCAACCTG AACATCCATG ACGCGCGCAT CATCACCTCG
AGCAGCCAGT TCACACTCGA CACCTACATC GTGCTCGACA ATGACGGCGG CTCCATCGGC
GACAACCCGC AACGGGTCAA GCAGATCCGC GACGGCCTGA CCGAGGCGCT GCGCAACCCC
GAGGACTACC CGACCATCAT CCAGCGACGG GTACCCCGCC AACTCAAGCA TTTCAACTTC
CCGCCGCAGG TGACCATCCT CAACGATGCA CAGCGGGCGG TAACCATCCT TGAGATCACC
GCGCCGGACC GCCCCGGGCT GCTGGCGCGG ATCGGGCGGA TCTTCCTGGA GTTCGACCTG
TCACTGCAGA ACGCCAAGAT CGCCACCCTC GGCGAACGCG TGGAAGACGT ATTCTTCATT
ACCGATGCCG ACAACCAGCC GCTGTCCGAC CCGCAGCTGT GCAGCCGCCT GCAGGAAGCG
ATCGTGCAGC AACTGCAGGC CGGCCAGGCT AGCGATGCCA GCCCGACTCG CGTGACCTTT
TAA
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| Protein sequence | MPQVDPELFD RGQFQAELAL KASPIAAFKK AIRQAGEVLD RRFRDGRDIR RLIEDRAWLV
DNILQQAWKQ FDWGDADGIA LVAVGGYGRG ELHPHSDIDL LILLRDAEHE QYRDAIERFL
TLLWDIGLEV GQSVRTVDEC AEQARADLTV ITNMMESRTI AGREALRQRM LEVTSTAHMW
PSKEFFLAKR AELKARHHKY NDTEYNLEPN VKGSPGGLRD IQTVLWVARR QYGTLNLHAL
AGEGFLLESE NELLASSQDF LWKVRYALHM LAGRAEDRLL FDHQRSIAAL LGYSDENPKR
AIEQFMQQYY RVVMSISQLC DLIIQHFEEV ILADDDSGTT QPLNARFRLH DGYIEAVNAN
VFKRTPFAML EIFVLMAQHP EIKGVRADTV RLLREHRHLI DDTFRNDIRN TSLFIELFKC
EIGIHRNLRR MNRYGILGRY LPEFGLIVGQ MQHDLFHIYT VDAHTLNLIK HLRKLQYTPV
SEKFPLASKL MGRLPKPELI YLAGLYHDIG KGRQGDHSEL GAVDAKKFCE RHQLPAWDSR
LIVWLVQNHL VMSTTAQRKD LSDPQVINDF ALHVGDETRL DYLYVLTVAD INATNPSLWN
SWRASLLRQL YSETKRALRR GLENPLDREE QIRQTQSAAL DILVREGTDP DDVEQLWSQL
GDDYFLKHNA ADVAWHSDAI LQQPADGGPL VLIKETTQRE FEGGTQIFIY APDQHDFFAV
TVAAMSQLNL NIHDARIITS SSQFTLDTYI VLDNDGGSIG DNPQRVKQIR DGLTEALRNP
EDYPTIIQRR VPRQLKHFNF PPQVTILNDA QRAVTILEIT APDRPGLLAR IGRIFLEFDL
SLQNAKIATL GERVEDVFFI TDADNQPLSD PQLCSRLQEA IVQQLQAGQA SDASPTRVTF
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