Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_4072 |
Symbol | lpxD |
ID | 6113041 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 4495378 |
End bp | 4496433 |
Gene Length | 1056 bp |
Protein Length | 351 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641623866 |
Product | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
Protein accession | YP_001750921 |
Protein GI | 170723233 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
TIGRFAM ID | [TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.125317 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGTGA CCATGACGCT CGGCCAGTTG GCCGAGGCCC TCGGGGCCAC TCTCAAAGGC TCCGAGGCGC TGCAGATCAC CGGTCTGGCC ACCTTGCAGG AGGCCGGCCC CGGTCAGTTG AGCTTTCTCG CCAACAAGCA GTACCGCAAA TACCTGGATA ACTGCCAGGC AGCAGCGGTG CTGCTGCAGG CTGCAGATGC CGAAGGCTTT GCCGGCAATG CGCTGATCGT GGCGGACCCG TACCTGGCCT ACGCGCGCAT TTCCCACCTG TTCGATCCCA AGCCCAAGGC TGTAGCGGGA ATTCATCCCA GCGCCGTGGT TGCCGAGGAT GCGCAGGTGG ATGCCAGTGC CAGCATTGGG CCGTTCGTGG TCATCGAGAG TGGCGCACGC ATTGGCGCCA ACGTCAGCAT CGGTGCGCAT TGCGTGATCG GCGCCCGTTG TGTGGTTGGT GAGGGTGGCT GGCTGGCACC GCGGGTCACG CTGTATCACG ACGTGACCAT AGGCAAGCGC GTGGTCATCC AGTCTGGCGC GGTGATCGGT GGTGAGGGCT TCGGCTTTGC CAACGAGAAG GGCGTATGGC GCAAGATCGC CCAGATCGGC GGTGTCACCA TAGGTGATGA CGTCGAAATC GGTGTGAACA CCGCTGTCGA CCGGGGCGCG TTGTCCGACA CGCGGATCGC CGACGGCGTC AAGCTCGACA ACCAGATCCA GATCGCTCAC AACGTGCAGA TCGGTGAGCA CACGGCCATG GCTGCCTGCG TCGGGATTTC CGGCAGCACG CGCATTGGCA AACACTGCAC CATTGCCGGT GGCGTCGGCA TGGTGGGGCA CATTGATGTC TGCGACAACG TATTCGTTTC CGGGATGACC ATGGTCACCC GTTCGATCAC CGAACCGGGT GCGTATTCTT CCGGCACTGC CATGCAGCCA CTGGCTGACT GGCGCAAGAG CGCTGCGCGT ATCCGCCAGC TGGATGACAT GTCCAAACGT CTCCAGCAGC TGGAAAAACG TGTCGATACC GTGACCTCAG GTGGCCAGCC GACATCAGAA GGCTGA
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Protein sequence | MTVTMTLGQL AEALGATLKG SEALQITGLA TLQEAGPGQL SFLANKQYRK YLDNCQAAAV LLQAADAEGF AGNALIVADP YLAYARISHL FDPKPKAVAG IHPSAVVAED AQVDASASIG PFVVIESGAR IGANVSIGAH CVIGARCVVG EGGWLAPRVT LYHDVTIGKR VVIQSGAVIG GEGFGFANEK GVWRKIAQIG GVTIGDDVEI GVNTAVDRGA LSDTRIADGV KLDNQIQIAH NVQIGEHTAM AACVGISGST RIGKHCTIAG GVGMVGHIDV CDNVFVSGMT MVTRSITEPG AYSSGTAMQP LADWRKSAAR IRQLDDMSKR LQQLEKRVDT VTSGGQPTSE G
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