| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4057 |
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| Symbol | ispF |
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| ID | 6113026 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 4478028 |
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| End bp | 4478501 |
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| Gene Length | 474 bp |
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| Protein Length | 157 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641623851 |
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| Product | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
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| Protein accession | YP_001750906 |
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| Protein GI | 170723218 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
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| TIGRFAM ID | [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00000202691 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGTATTG GCCACGGCTA CGATGTGCAC CGTTTTTGCG ACGGTGATTT CATTACCCTG
GGTGGGGTGC GTATCCCCCA CAAATACGGC CTCCTGGCCC ACTCCGACGG TGACGTGCTG
CTGCATGCCC TGAGCGATGC CTTGCTTGGC GCGGCGGGTC TGGGTGACAT CGGCAAGCAC
TTCCCCGATA CGGACCCGCA ATTCAAGGGC GCCGACAGTC GCGTACTGCT ACGCCATGTG
GTCGGCATCG TCCAGGCCAA AGGCTGGAAA GTCGGTAATG TCGACGCCAC CATCGTTGCC
CAGGCGCCGA AAATGTCTCC GCATATCGAA ACCATGCGCC AACGGATCGC CGAGGACCTG
CAGGTCGAAC TCGACCAGGT CAACGTCAAG GCCACCACCA CCGAGAAACT GGGCTTCACC
GGCCGCGAGG AGGGTATCGC CGTGCATGCG GTCGCCCTGC TGCTGCCAGC ATGA
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| Protein sequence | MRIGHGYDVH RFCDGDFITL GGVRIPHKYG LLAHSDGDVL LHALSDALLG AAGLGDIGKH
FPDTDPQFKG ADSRVLLRHV VGIVQAKGWK VGNVDATIVA QAPKMSPHIE TMRQRIAEDL
QVELDQVNVK ATTTEKLGFT GREEGIAVHA VALLLPA
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