| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4022 |
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| Symbol | |
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| ID | 6112991 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 4448011 |
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| End bp | 4448937 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641623816 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001750871 |
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| Protein GI | 170723183 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0000162423 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGATTCA CACTTCGTCA GCTACAGGTA TTCGTCGCCG TGGCCCAGCA TCAGAGCGTC
TCTCGAGCCG CCAGTGTGCT GGCCCTGTCG CAGTCGGCTG CCAGCACGTC CATCACTGAA
CTGGAGCGGC AATCGAGCTG CCAGTTGTTC GACCGTGCAG GCAAACGCCT GGCCCTCAAC
GCCTTGGGGC ATCAGCTGCT GCCGCAAGCG GTTGCGCTGC TCGACCAGGC CAAGGAGATA
GAAGACCTGC TCAACGGCAA GTCCGGTTTT GGCTCACTGG CAGTCGGCGC CACACTGACC
ATTGGCAACT ACCTGGCCAC CTTGCTGATC GGCAGCTTCA TGCAGGTACA CCCGGAAAGC
CAGGTCAAGC TGCACGTGCA GAACACAGCC CATATCGTGC ACCAGGTTGC ACAATACGAA
ATTGATCTGG GTCTGATCGA AGGCGACTGC AACCATCCGG ACCTGGAGGT ACAGCCTTGG
GTTGAGGATG AGCTGGTGGT GTTCTGCGCG CCGCAACACC CGCTGGCCAA GGTGGGCCGC
GCAGATATCG AAAGCCTGTC CCAGGAAGCC TGGATTCTTC GCGAACAAGG CTCCGGCACC
CGCCTGACAT TCGATCAGGC CATGCGGCAT CATCGCGCCA ACCTGAACAT ACGCCTGGAG
CTCGAGCATA CCGAAGCGAT CAAGCGTGCC GTGGAATCAG GCCTGGGCAT TGGCTGCATA
TCGCGCCTGG CCCTGCGCGA TGCCTTCCGG CGCGGCAGCT TGGTGCCGGT CGAAACCCCG
GAGCTGGACC TGATGCGCCA GTTCTACTTC ATCTGGCACA AACAGAAATA CCAGACCTCG
GCCATGCGCG AGTTTCTCGA GTTGTGCCGC AGCTTCACCG CAGGGTTTAC GCGCAGTGAC
GAGATCGTCT TGCCACCGAT CGCTTAG
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| Protein sequence | MRFTLRQLQV FVAVAQHQSV SRAASVLALS QSAASTSITE LERQSSCQLF DRAGKRLALN
ALGHQLLPQA VALLDQAKEI EDLLNGKSGF GSLAVGATLT IGNYLATLLI GSFMQVHPES
QVKLHVQNTA HIVHQVAQYE IDLGLIEGDC NHPDLEVQPW VEDELVVFCA PQHPLAKVGR
ADIESLSQEA WILREQGSGT RLTFDQAMRH HRANLNIRLE LEHTEAIKRA VESGLGIGCI
SRLALRDAFR RGSLVPVETP ELDLMRQFYF IWHKQKYQTS AMREFLELCR SFTAGFTRSD
EIVLPPIA
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