Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_4001 |
Symbol | |
ID | 6112967 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 4424331 |
End bp | 4425077 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641623792 |
Product | hypothetical protein |
Protein accession | YP_001750850 |
Protein GI | 170723162 |
COG category | [S] Function unknown |
COG ID | [COG0217] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGGTC ATTCCAAGTG GGCGAACATC AAGCACCGCA AAGAGCGCCA GGATGCCAAG AGAGGCAAGA TCTTCACCAA GTGGATCCGT GAGCTGACCG TCGCTGCCAA GCAGGGTGGT GGCGATCCGG CCTCCAATCC GCGCTTGCGC CTGGCGCTGG ACAAGGCCCT GGGTGCCAAC ATGAGCCGCG ATATCATCGA CCGCGCCGTG GCCCGTGGTG CTGGCACCAA CGAAAGCGAT AACGTTGAAG AGCTGAGCTA CGAGGGTTAC GGCCCGGGCG GGGTGGCGAT CATGGTCGAG GCCATGACCG ACAACCGCAA CCGTACCGCG GCCGCCGTGC GGCATGCCTT CACCAAGTGT GGCGGCAACC TCGGTACCGA TGGCTCGGTG GCCTACCTGT TCGAGCGCAA GGGGCAGATC AGCTTCGCGC CGGGTGTGGA CGAAGATGCC CTGATGGAAG CCGCCATGGA AGCCGACGCC GACGATGTCG TGGCCAACGA AGACGGTTCG TTCGAGGTGT TCACCTCGTT CAACAGCTTC TATGCCGTGC GTAATGCCCT GGAGGAAGCC GGCTTCAAGG CCGCAGATGC GGAAATCGTC ATGCAGCCGA CCACCAGTGC CGAGCTGGAT CAGGAGGGGG CGGAGAAAGT GCTCAAGCTG ATCGACATGC TCGAAGACCT GGATGACGTG CAGAACGTCT ACTCCAATGC ACAGATTTCC GACGAGATCA TGGAAAAACT CGGCTAA
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Protein sequence | MAGHSKWANI KHRKERQDAK RGKIFTKWIR ELTVAAKQGG GDPASNPRLR LALDKALGAN MSRDIIDRAV ARGAGTNESD NVEELSYEGY GPGGVAIMVE AMTDNRNRTA AAVRHAFTKC GGNLGTDGSV AYLFERKGQI SFAPGVDEDA LMEAAMEADA DDVVANEDGS FEVFTSFNSF YAVRNALEEA GFKAADAEIV MQPTTSAELD QEGAEKVLKL IDMLEDLDDV QNVYSNAQIS DEIMEKLG
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