Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_3992 |
Symbol | |
ID | 6112958 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 4417172 |
End bp | 4417669 |
Gene Length | 498 bp |
Protein Length | 165 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641623783 |
Product | peptidoglycan-associated lipoprotein |
Protein accession | YP_001750841 |
Protein GI | 170723153 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | [TIGR02802] peptidoglycan-associated lipoprotein |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.603171 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAATGC TGAAGTTTGG TAAATTTGCT GCGCTGGCTC TGGCCATGGC TGTAGCTGTA GGTTGCTCCT CGAAGGGCGG TGACAACGCT GGCGAAGGCG CTGTCGACCC TAACGCTGGC TACGGTGCCA ACACTGGCGC TGTTGACGGT TCCCTGAGCG AAGAAGCCGC CCTGCGCGCA ATCACCACCT TCTACTTCGA ATACGACAGC TCGGACCTGA AGCCAGAAGC CATGCGCGCT CTGGACGTTC ACGCCAAGGA CCTGAAGTCC AACGGCAACC GTGTTGTTCT GGAAGGCAAC ACCGACGAGC GCGGTACTCG CGAGTACAAC ATGGCTCTGG GCGAGCGTCG TGCCAAGGCC GTTCAGCGCT ACCTGGTTCT GCAGGGTGTT TCCCCTGCTC AGCTGGAACT GGTCTCCTAC GGCGAAGAGC GTCCAGTTGC CACCGGCAAC GACGAGCAGT CCTGGGCTCA GAACCGCCGC GTAGAACTGC GTAAGTAA
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Protein sequence | MEMLKFGKFA ALALAMAVAV GCSSKGGDNA GEGAVDPNAG YGANTGAVDG SLSEEAALRA ITTFYFEYDS SDLKPEAMRA LDVHAKDLKS NGNRVVLEGN TDERGTREYN MALGERRAKA VQRYLVLQGV SPAQLELVSY GEERPVATGN DEQSWAQNRR VELRK
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