Gene PputW619_3992 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_3992 
Symbol 
ID6112958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp4417172 
End bp4417669 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content60% 
IMG OID641623783 
Productpeptidoglycan-associated lipoprotein 
Protein accessionYP_001750841 
Protein GI170723153 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID[TIGR02802] peptidoglycan-associated lipoprotein 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.603171 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAATGC TGAAGTTTGG TAAATTTGCT GCGCTGGCTC TGGCCATGGC TGTAGCTGTA 
GGTTGCTCCT CGAAGGGCGG TGACAACGCT GGCGAAGGCG CTGTCGACCC TAACGCTGGC
TACGGTGCCA ACACTGGCGC TGTTGACGGT TCCCTGAGCG AAGAAGCCGC CCTGCGCGCA
ATCACCACCT TCTACTTCGA ATACGACAGC TCGGACCTGA AGCCAGAAGC CATGCGCGCT
CTGGACGTTC ACGCCAAGGA CCTGAAGTCC AACGGCAACC GTGTTGTTCT GGAAGGCAAC
ACCGACGAGC GCGGTACTCG CGAGTACAAC ATGGCTCTGG GCGAGCGTCG TGCCAAGGCC
GTTCAGCGCT ACCTGGTTCT GCAGGGTGTT TCCCCTGCTC AGCTGGAACT GGTCTCCTAC
GGCGAAGAGC GTCCAGTTGC CACCGGCAAC GACGAGCAGT CCTGGGCTCA GAACCGCCGC
GTAGAACTGC GTAAGTAA
 
Protein sequence
MEMLKFGKFA ALALAMAVAV GCSSKGGDNA GEGAVDPNAG YGANTGAVDG SLSEEAALRA 
ITTFYFEYDS SDLKPEAMRA LDVHAKDLKS NGNRVVLEGN TDERGTREYN MALGERRAKA
VQRYLVLQGV SPAQLELVSY GEERPVATGN DEQSWAQNRR VELRK