Gene PputW619_3964 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_3964 
Symbol 
ID6112928 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp4387936 
End bp4388715 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content54% 
IMG OID641623753 
Productputative phage repressor 
Protein accessionYP_001750813 
Protein GI170723125 
COG category[K] Transcription 
COG ID[COG2932] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.072898 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTAT CTGAACGAAT CAGGGCCGCC AGGCTGCACG CAGGCCTTAC TCAGCGCGAT 
CTCGCTGAAA AAATTGGTAT TGCCCAAACA GCGATAAGTC AGCTTGAGTC AGGCAAGACC
CAGCGATCTT CATACCTAAT GGCCATAGCT AGCACTTGCG GCGTCAGCAG CGCTTGGCTT
GCTGAGGGGT GGGGCACGAT GCTTAGAGAT GCGGCATCCG TGGAAGCGTT TTTAAACTCT
GGGGACCACC CCTTAAAAAC TGCTCATGAG AACGCTAAGC CCGTGTACGA CCCAGGCGTT
GCGGTCGCGC TTGAGCCGAT CCAGGCATGG GATGACGATA CGCCGCTGGA GGACGATGAA
GTTGAGATCC CCTTCCTGCG AGAAGTGGAA CTGTCTGCAG GGAGCGGAAG AACGGTGATT
GAGCGAAGCT CGACAGCAAA GCTTAGGTTT GGAAAACGAT CCCTCCGTGC GCATAACGTA
CAATTCGACC AGGCTGTCTG CGTGGTTGTG TCAGGAAATT CGATGGAGCC AGTGCTTCCA
GATGGGAGCA CTGTAGGCGT GAATATCGGG CAAACGCAGA TCGTCGATGG AAAAATGTAC
GCTATCAAGC ATGATGGTCA GCTCCGAGTA AAGGTTCTGT ATCGCGTTCC TGGAGGAGGA
GTAAGATTCC GCAGCTTCAA CCAAAGCGAG CATCCTGACG AGACCTACAC CGCAGATGAG
ATGGCCGAGA AGTCCATCGA GATCATTGGT CGTGTCTTCT GGGGAGCATC CTTCTACTAG
 
Protein sequence
MKLSERIRAA RLHAGLTQRD LAEKIGIAQT AISQLESGKT QRSSYLMAIA STCGVSSAWL 
AEGWGTMLRD AASVEAFLNS GDHPLKTAHE NAKPVYDPGV AVALEPIQAW DDDTPLEDDE
VEIPFLREVE LSAGSGRTVI ERSSTAKLRF GKRSLRAHNV QFDQAVCVVV SGNSMEPVLP
DGSTVGVNIG QTQIVDGKMY AIKHDGQLRV KVLYRVPGGG VRFRSFNQSE HPDETYTADE
MAEKSIEIIG RVFWGASFY