| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3875 |
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| Symbol | |
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| ID | 6112839 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 4309478 |
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| End bp | 4310395 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641623665 |
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| Product | urea amidolyase related protein |
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| Protein accession | YP_001750725 |
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| Protein GI | 170723037 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1984] Allophanate hydrolase subunit 2 |
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| TIGRFAM ID | [TIGR00724] biotin-dependent carboxylase uncharacterized domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.377031 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCAAC TGAAGATCGA AGCCAGCACC GCCTTGTGCC AGTTGCAGGA TGCCGGGCGC
TTTGGTGTGC GGCACCTGGG GGTGACCCAG GGCGGTGCGC TGGATTGGGT GGCGATGAAT
TGGGCCAACT GGCTGCTGGG CAACCCGTTG GGCGCGCCGG TGGTCGAGGT GGCGCTGGGC
GGCTTCACGG TAGTGGCTGA GCAGGATTGC GTACTCGCCC TGGCCGGTGC CGACCTGGAT
GCTCGTGTCG ATGACCAGCC GCTGGCCCCC TGGCGCAGCT TTGCCTTGGC CAAGGGCCAG
CGGCTGACCT TGAAGCAACC GAAGCAGGGC GTACGTGCTT ATCTTGCGGC GCCGGGCGGG
TTTCAAGGTG AAGCCGTGCT GGGGAGCTGC GCTACTGTTG TGCGTGAAGA GCTGGGCGGT
ATCGATGGGC GAGGGGCCGC GCTGGGCAAA GGGCAATTGT TGGCGTTTGC CGGCACGCAG
CCGGCCCTGC GCGAAGTGCC AGAGGTGCTG CGGCCCTGTT ATCGGCAAAA GCCCGTGCTC
GATCTGGTCA TGGGCGCGCA GATCGGTGAT TTCAGCGGTA TGAGCCTGTT CGAGGCGTTC
AACCGTGACT GGACGCTGGA CAGCCGTGGC GACCGCATGG GCATTCGTTT GCTCGGGCCG
CAGCTTGTTT ATCAGGGCGC GCCGATGATT TCGGAGGGTA TTGCGTTAGG GGCGGTACAG
GTGCCCCCGG ACGGGCAGCC GATCGTGCTG CTCAATGACC GGCAGACCAT CGGTGGCTAT
CCGCGGCTGG GGGCGTTGAC GCCGTTGGCG TTGGCGCAGC TGGCCCAGTG CATGCCGGGG
GCGGCGGTGC GGTTCAGGGC GGTGGTGCAG GAAGAGGCTT GGCGGGAGCA GCAGGCTTGC
CTTAACGGTT GGCGGTGA
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| Protein sequence | MTQLKIEAST ALCQLQDAGR FGVRHLGVTQ GGALDWVAMN WANWLLGNPL GAPVVEVALG
GFTVVAEQDC VLALAGADLD ARVDDQPLAP WRSFALAKGQ RLTLKQPKQG VRAYLAAPGG
FQGEAVLGSC ATVVREELGG IDGRGAALGK GQLLAFAGTQ PALREVPEVL RPCYRQKPVL
DLVMGAQIGD FSGMSLFEAF NRDWTLDSRG DRMGIRLLGP QLVYQGAPMI SEGIALGAVQ
VPPDGQPIVL LNDRQTIGGY PRLGALTPLA LAQLAQCMPG AAVRFRAVVQ EEAWREQQAC
LNGWR
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