| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3824 |
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| Symbol | |
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| ID | 6112788 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 4256612 |
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| End bp | 4257415 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641623615 |
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| Product | LuxR family transcriptional regulator |
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| Protein accession | YP_001750675 |
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| Protein GI | 170722987 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00247699 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.327982 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAGCG ACCACGCCAA CCGCCTGGCC ACGGTGATTC GCAGCATCGG CAGCGACGCA
CTGGGCCCGG CCATCGACAC TGCGCTCAAG GGCGTGGTCG ATTACGACAT GAGCTGCGCT
TACCTGTTTC GCTTCAACCA GCCGGCGCTG TTGGTGCACG ATGGCTACAA CCAGCGGGTG
ACCGAGCGTA CGCTCAAGGC GTATCTGCGC GGGGGCTATT TGCTCGACCC GTTCTACGTC
GCTTGCACCA ACAATCACCC CACGGGGCTG TGGCGCATGA GCGAGCTGGC GCCGGACAGC
TTCTTCGCCT CGGGCTTTTC CATCTCGCCC GACATCCACC CCTGTGTCTC GTCGCACCAC
GGCAGCTTGA TCGAAGAAAT CGGCTTCATC GTCCCTGTGC GCCCACGCAC GGCGCTGGTG
TTTTCCTTGA TGCGCGGCTT GCACAAGGGG GCGTTCGAAA CCGATGAAAC CCAACGCCTC
GCTGCGCTGA CGCCGCTGAT CGATGCCATT TTCAGCCAGC ACCTGCACCT TGCTCATGCC
GAAGACTTGG CCGACCCGCA GGACTCGGAC AGCCAGTTGG AAGACGCCTT CGTCGATATC
CTCCAGGGCC AGTTGACCGA AACCCAGCGG CATGTGGCCA AGCTGATTTT GCAGGGGCAC
AGCAGCCAGT CGATCTCGCG GGCGCTGGGG ATTTCGGCAG GGACGGTCAA GGTGCACCGG
CACAACATCT GGCAGCGGTT GGGGATTGCC GGGAATGCGG AGTTGTTTCG GTTGTTTATT
GGCTATCTCA CCAAGCAGCA ATGA
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| Protein sequence | MNSDHANRLA TVIRSIGSDA LGPAIDTALK GVVDYDMSCA YLFRFNQPAL LVHDGYNQRV
TERTLKAYLR GGYLLDPFYV ACTNNHPTGL WRMSELAPDS FFASGFSISP DIHPCVSSHH
GSLIEEIGFI VPVRPRTALV FSLMRGLHKG AFETDETQRL AALTPLIDAI FSQHLHLAHA
EDLADPQDSD SQLEDAFVDI LQGQLTETQR HVAKLILQGH SSQSISRALG ISAGTVKVHR
HNIWQRLGIA GNAELFRLFI GYLTKQQ
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