| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3814 |
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| Symbol | |
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| ID | 6112778 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 4248142 |
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| End bp | 4249035 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641623605 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001750665 |
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| Protein GI | 170722977 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0217357 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTCGA CCTTGCCCGA CCTGAAACTG CTGCGCATCT TTGTCAGCGT GGTGCGCCAC
CAAGGCTTCG CCAATGCCCA GCGCGATCTC AACCTGTCGA CCTCGGCCAT CAGTACCTAC
ATGAGCCAGC TCGAAGGTGC CCTGGGCATC GTGCTGTGCC ACCGCGGGCG TGGCGGTTTC
AGCCTGACCA GCAAGGGCGA GCTGTTCCAT CAGGAGACCT TGCGCCTGCT GGCAGAGCTC
GATGGCTTCG AGCAATACGC CGCAGCGCTC AAGGGTGAGC TGCGCGGTAC GCTCAACCTC
GGGGTGATTG ACTCGACCGT GGGCGACCGC GCGCTGCCTT TGGCTGAAGC GATCGGAGCC
TACAGCCAGG AGCACCCCGC AGTGCACCTG CACCTTTCGG TATCCAGCCC CTATGAGCTG
CAGCTTGGCG TGCAGGACAA CCGCCTGGAC CTGGCTATCG GGGCGTTCTC CTCGCGCATG
AGTGGCCTGG TTTACCAGCC GCTGTACCGC GAGCAGCATT GGTTGTACTG CAGCAGTCGC
CACCCTTTGT TCGCCGAGCG GCGTATCCCC GAACCGGTGG TGACCCAGCA GCGCATGGTC
GGGCGCGGTT ACTGGAGCCA GGCGGAGTTG GCCCGGCATG GCTTCAAACA CAGCGCGGCG
ACCGTCGAAA GCATGGAGGC GCAGCTCATT CTGATCCTGT CAGGTGCCTA TATCGGCTAC
CTGCCCGAGC ACTATGCCCA GGCCTGGGTC GACAAGGGCG ACCTGCGCGT ATTGTCTCCG
GCCACTTTCG GCTATCAGGC GCCATTTTCG CTGATCATCC GCCGCGGGCG CAGCCGTGAA
CCCTTGATTC AGACCTTCCG CGACCTGCTC AAAAGCCAGC TCAATGTTGG CTGA
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| Protein sequence | MASTLPDLKL LRIFVSVVRH QGFANAQRDL NLSTSAISTY MSQLEGALGI VLCHRGRGGF
SLTSKGELFH QETLRLLAEL DGFEQYAAAL KGELRGTLNL GVIDSTVGDR ALPLAEAIGA
YSQEHPAVHL HLSVSSPYEL QLGVQDNRLD LAIGAFSSRM SGLVYQPLYR EQHWLYCSSR
HPLFAERRIP EPVVTQQRMV GRGYWSQAEL ARHGFKHSAA TVESMEAQLI LILSGAYIGY
LPEHYAQAWV DKGDLRVLSP ATFGYQAPFS LIIRRGRSRE PLIQTFRDLL KSQLNVG
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