| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3803 |
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| Symbol | |
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| ID | 6112767 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 4226367 |
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| End bp | 4228550 |
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| Gene Length | 2184 bp |
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| Protein Length | 727 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641623594 |
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| Product | patatin |
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| Protein accession | YP_001750654 |
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| Protein GI | 170722966 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.799265 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00000293733 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGCCGCC TGCTGTTCTG CCTTTTACTG ACGCTCAGCT CATTCACCGT GCTCGCCGAG
GCGGCACGCC CCAAGGTCGG CCTGGTACTC TCCGGGGGCG CCGCCCGTGG CCTGGCCCAC
ATCGGCGTAC TCAAGGCCCT GGAGGAACAG GGCGTGCGCA TCGACGCCAT CGCCGGCACC
AGCATGGGCG CAGTGGTTGG CGGCCTGTAT GCATCCGGCT ACAGCATCGA TGAGCTGGAA
AAGCTCGCCA CCACGCTCGA CTGGCAGCAG GCGTTGTCAG ATGCTCCACC GCGCAAGGAC
GTGCCTTTCC GGCGCAAGCA GGATGACCGT GACTTTCTGG TCAAGCAGAA GCTGAGTTTT
CGAGACGACG GCAGCCTCGG CCTGCCACTG GGGGTGATTC AGGGCCAGAA CCTCGCACTG
CTGCTGGAAA GCAAGCTGGC CCACACAGCC GATACCCGCG ATTTCGACAA GTTGCCGATA
CCGTTCCGCG CCGTGGCAAC CGACATCGCC AGCGGCGAGA AGGTGGTATT CCGCCGCGGC
CACCTACCCC AAGTGATCCG CGCCAGCATG TCGATCCCGG CGGTCTTCGC CCCGGTCGAG
CTTGATGGGC GCCTGCTGGT GGATGGCGGC ATGGTCGACA ACATACCCGT GGATGTGGCC
CGGGACATGG GCGTTGATCT GGCCATCGTC GTCGATATCG GCACCCCGCT GCGTGACCGC
AAGCAACTGG CCACGGTGGT GGATGTACTC AACCAGTCGA TCACCCTGAT GACCCGGCGC
AACTCCGAAG AACAACTGGC CAGTTTGCAT AGGGATGACA TCCTCATCCA GCCACAGCTG
GCCGCGTTCG GCGTCACCGA CTTTGGCCGC GCGCGCGACA TGATCGAGGC CGGCTACCGT
GCAACCCGCC TGCTCGACCC TCGCCTGGCT GCCCTGCGCC AGCCTGAAGG CGATGCCGAA
CTGGCCATGG CACGCTCACC GCGCCAGCGC ACCCCGATGA TCACCGCCAT CAAGGTGGAG
AACGATTCCA AGGTCAGCGA TGACGTGATC CGCTATTACA TCCGCCAGCC GATCGGCGAG
CCGCTGGAAC TCGACCGCCT GCAAACCGAC ATGGGCACCC TGTATGGCCT GGACTACTTC
GACCGTGTGC AATACCGCGT GGTCCATAAA GGCAACGACA ACACTTTAGT GATCAACGCC
CGTGGCAAGC GCGGCGGCAC CGATTACCTG CGCCTGGGCC TGAACCTGTC GGACGACCTG
CGCGGGGACA GCGCCTTCAA CCTGGGCGCC AGCTATCGGG TCAATGGTAT CAACCAGTTG
GGCGCCGAGT GGCTGACGCG CGCGCAGATC GGTGACAAGC AGGAGCTCTA CAGCGAGTTC
TACCAGCCGC TTGACGTGGG TTCACGCTAT TTCATCGCAC CTTATCTGGA CTTCGGCTCA
CAGAACATCG AAGCCACCCT GGATAGCGAT CCGGTAGCCG AATACCGTCT CGAGCGCTAT
GGCTTCGGCC TCAACGTCGG CCGCCAGATC GGCACCTATG GCGAAGTGCG CCTGGGTGCG
GGCAAGGCCT GGGGCGAGGC CGAGGTGCGC ATTGGTGAAC AGGACCTGCC CAAGGTCAGT
TTCAACGAAG GTTTCTACGA GCTGAAATAC TCGTTCGACA CGCTCGACAA TGTGTACTTC
CCGCACAGTG GCGAGAATAT AGGCCTGACC CTGCGCAAAT ACGACAAATC GCTGGACTCG
GACGCGGACT ATCGCCAGTG GATGTTCAAT CTGGACAAGG CTTTGAGCAG CGGGCCGAAC
ACGCTGGTGC TCGGTGGTGG GTATGGACGC ACGCTCGACG ACACCGAAGT CGTGACGTCG
AGCTTTGTGC TTGGCGGGGC GCGCCAACTG TCCGGGTTCC GCCAGGACTC GGTATCAGGG
CAGAACGTGA GCCTGCTGCG CATGGTCTAT TACCGCCGCC TCACGCCGCG TTCCTATCTG
CCGCTGGACT TCCCGCTTTA CATAGGCGGG TCACTGGAGC GCGGACGGGC GTGGAACAAC
GACAACGAGT TCGACAGTGG CTACATCAAT GCCGCCAGTA TCTTCCTGGG CCTAGACACG
CCACTCGGGC CGTTGAGCCT CAGCTATGGA GCCAACAGTG CGGATGAGCA GGCAATCTAC
TTGAACCTGG GGAATACATT CTGA
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| Protein sequence | MRRLLFCLLL TLSSFTVLAE AARPKVGLVL SGGAARGLAH IGVLKALEEQ GVRIDAIAGT
SMGAVVGGLY ASGYSIDELE KLATTLDWQQ ALSDAPPRKD VPFRRKQDDR DFLVKQKLSF
RDDGSLGLPL GVIQGQNLAL LLESKLAHTA DTRDFDKLPI PFRAVATDIA SGEKVVFRRG
HLPQVIRASM SIPAVFAPVE LDGRLLVDGG MVDNIPVDVA RDMGVDLAIV VDIGTPLRDR
KQLATVVDVL NQSITLMTRR NSEEQLASLH RDDILIQPQL AAFGVTDFGR ARDMIEAGYR
ATRLLDPRLA ALRQPEGDAE LAMARSPRQR TPMITAIKVE NDSKVSDDVI RYYIRQPIGE
PLELDRLQTD MGTLYGLDYF DRVQYRVVHK GNDNTLVINA RGKRGGTDYL RLGLNLSDDL
RGDSAFNLGA SYRVNGINQL GAEWLTRAQI GDKQELYSEF YQPLDVGSRY FIAPYLDFGS
QNIEATLDSD PVAEYRLERY GFGLNVGRQI GTYGEVRLGA GKAWGEAEVR IGEQDLPKVS
FNEGFYELKY SFDTLDNVYF PHSGENIGLT LRKYDKSLDS DADYRQWMFN LDKALSSGPN
TLVLGGGYGR TLDDTEVVTS SFVLGGARQL SGFRQDSVSG QNVSLLRMVY YRRLTPRSYL
PLDFPLYIGG SLERGRAWNN DNEFDSGYIN AASIFLGLDT PLGPLSLSYG ANSADEQAIY
LNLGNTF
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