| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3718 |
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| Symbol | |
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| ID | 6112677 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 4134311 |
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| End bp | 4135393 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641623504 |
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| Product | CDP-glucose 4,6-dehydratase |
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| Protein accession | YP_001750569 |
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| Protein GI | 170722881 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | [TIGR02622] CDP-glucose 4,6-dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.316077 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGCAG TGGGCCTGAG TCCAGCGTTC TGGCAGGGCA AGCGTGTTCT GCTCACCGGT
CACACGGGTT TCAAAGGCAG TTGGCTGGCG CTCTGGTTAC GTGAGCTCGG GGCTCAGGTC
ACTGGCTTCG CGCTGGACCC TGGCACCGAA CCAAGCCTGT TCGAGCTTGC CCAGGTCGGC
AGCGATATTA CCGACGTGCG CGGCGACCTG CGCGACCTCG GCGCGCTGCT AGAAGCTGTG
GCCCAGGCCC AGCCGGAAAT CGTCCTGCAC CTGGCGGCTC AGCCACTGGT GCGCGAGGCC
TACCGTGACC CGCTAGGCAC CTATTCCAGC AACGTCATGG GCACCCTTAA TCTGCTTGAA
GCGGTACGCC AGGTTGGCGG GGTGCGTGCG TGCGTCCTGG TAACCACCGA TAAGGTCTAT
GCCAACCAGG AATGGCCCTG GCCATACCGC GAGAACGAGG CCCTGGGCGG GCATGACCCG
TACAGCAGCA GCAAGGCCTG CTGCGAGCTG CTGGCGCAGT CCTATGCCGC GTCATTCTTC
CCGGCCGCCG AACACGCAGA ACATGGCGTG GCACTGGCCA CCGCGCGCGC CGGCAATGTA
CTGGGCGGCG GAGACTTTGC CGCAGAGCGG CTTGTCCCCG ATGTGCTCAA GGCTTGGTCG
GCCGGGGCGC CGGTCACCCT GCGCTACCCG CAGGCCGTGC GCCCCTGGCA GCACGCCCTG
GAACCGCTGG CCGGCTACCT GCAACTGGCC GAGCGCCTGT ACACCCAGGG GCCGGCCTGC
GCCGGCGCGT GGAACTTCGG CCCGAGCGAA GGCGACATGT GCAGCGTCGG TGAGGTGGTC
GACCGCCTGG CCCGGCAATG GCCGCAGGCA CCAGGGTTAC GTGTCGAGCC AAGCGAGTTG
CACGAAGCAG GGTTGCTACG CCTGGACAGC TCTCGTGCCC GCCAGGTGCT GGGCTGGCGC
ACGCGCTGGT CGTTGCACGA ATGCCTGCAG CACACGCTCG ACTGGCACCT GGCGTGGCAG
CGTGGCGATA ACATGCGCGC CGTCACGCTG CACCAGCTGA ACCTGTACAC GGAGTTGCCG
TGA
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| Protein sequence | MEAVGLSPAF WQGKRVLLTG HTGFKGSWLA LWLRELGAQV TGFALDPGTE PSLFELAQVG
SDITDVRGDL RDLGALLEAV AQAQPEIVLH LAAQPLVREA YRDPLGTYSS NVMGTLNLLE
AVRQVGGVRA CVLVTTDKVY ANQEWPWPYR ENEALGGHDP YSSSKACCEL LAQSYAASFF
PAAEHAEHGV ALATARAGNV LGGGDFAAER LVPDVLKAWS AGAPVTLRYP QAVRPWQHAL
EPLAGYLQLA ERLYTQGPAC AGAWNFGPSE GDMCSVGEVV DRLARQWPQA PGLRVEPSEL
HEAGLLRLDS SRARQVLGWR TRWSLHECLQ HTLDWHLAWQ RGDNMRAVTL HQLNLYTELP
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