| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3717 |
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| Symbol | |
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| ID | 6112676 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 4133754 |
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| End bp | 4134314 |
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| Gene Length | 561 bp |
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| Protein Length | 186 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641623503 |
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| Product | dTDP-4-dehydrorhamnose 3,5-epimerase |
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| Protein accession | YP_001750568 |
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| Protein GI | 170722880 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes |
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| TIGRFAM ID | [TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.222502 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACTGATC TGCTGCTGCA AGCCTTGCCA CTGGGTGGCC TGTTCAGTGT CCAGCACAAG
CGTCATGGCG ATGCCCGCGG GCAGTTCGCG CGGCTGTTCT GCGAATCCAG CCTGGGCGCC
CTGGGTGCGC CGTTCCATGT GCGCCAGATC AATCACTCGC ACACTCAGGG CTCAGGCAGC
GTGCGCGGCC TGCACTATCA GACCGGCGAC ACCCCGGAGG CCAAGCTGAT CACCTGCCTG
CGCGGTGAGG TGTGGGACGT GGCAGTGGAC CTTCGCGAAG GCTCGCCAAC CTTCCTGCAC
TGGCACGCCG AGCACTTGCG AGCCGGCGAT GGCCGCAGCC TGTTGATACC GGCCGGCTTT
GCCCATGGTT TCCAGGTGCT GAGCGAGGAT GCCGAGCTGC TTTACCTGCA CAGTGCCGAC
TATGCGCCGG GCCGCGAAGG CGGGCTGTCG GTACTCGATC CGAAGTTGGC CATCCGTTGG
CCGCTCGCTG TCAAGAATCT GTCGGCCCGG GATGCCGCTC ATCCCTTGCT GGACCTGTCG
TTTACCGGAG TGCGTCCATG A
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| Protein sequence | MTDLLLQALP LGGLFSVQHK RHGDARGQFA RLFCESSLGA LGAPFHVRQI NHSHTQGSGS
VRGLHYQTGD TPEAKLITCL RGEVWDVAVD LREGSPTFLH WHAEHLRAGD GRSLLIPAGF
AHGFQVLSED AELLYLHSAD YAPGREGGLS VLDPKLAIRW PLAVKNLSAR DAAHPLLDLS
FTGVRP
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