| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3694 |
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| Symbol | fliF |
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| ID | 6112653 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 4107858 |
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| End bp | 4109636 |
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| Gene Length | 1779 bp |
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| Protein Length | 592 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641623480 |
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| Product | flagellar MS-ring protein |
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| Protein accession | YP_001750545 |
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| Protein GI | 170722857 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
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| TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGAAG CAGTCGTCGA TAACGCCCCC GCCAAAAGTG GCCCGCCAGC GTCCAAACCG
CCGCTGTTCG GCATGGCGTT TCTGGAAAAC ATTTCGCAGA TGCCCATGCT GCGTCAGGTC
GGCCTGCTGG TCGGGTTGGC GGCGAGCGTG GCGATCGGCT TCGCCGTGGT GCTGTGGTCG
CAGCAGCCGG ACTACCGCCC GCTGTATGGC AGCCTGGCGG GTATGGACAC CAAGCAGGTC
ATGGATACCC TGGCCGCTGC AGACATTCCC TACAATGTCG AGCCCAATTC CGGTGCTCTG
CTGGTCAAGG CCGACGACCT CTCCCGTGCG CGCCTGAAAC TGGCAGCTGC CGGCGTTGCG
CCAAGCGACG GCAACGTCGG CTTCGAACTG CTCGACAAGG AGCAGGGCCT GGGTACCAGC
CAGTTCATGG AAGCCACCCG TTACCGCCGC AGCCTGGAAG GCGAGTTGGC GCGTACGGTC
TCCAGCCTGA ACAACGTCAA AGCAGCGCGC GTGCACCTGG CGATCCCGAA AAGCTCGGTG
TTCGTGCGCG ATGAGCGCAA GCCAAGCGCC TCGGTCCTGG TCGAACTGTA CCCGGGCCGT
TCGCTGGAAG CCGGCCAGGT GATGGCGATC GTCAACCTGG TCGCCACCAG TGTGCCCGAG
CTGGACAAGT CGCAGGTCAC CGTGGTCGAC CAGAAAGGCA ACCTGCTCTC CGACCAGTTG
CAGGACACGG CGTTGACCAT GGCTGGCAAG CAGTTCGACT ACAGCCGCCG CATGGAAGGC
ATGCTCACCC AGCGTGTGCA TAACATCCTG CAACCGGTAC TGGGCAACGA TCGCTACAAG
GCCGAGGTGT CGGCGGACCT TGACTTCAGT GCAGTGGAAT CCACTTCCGA GCAATTCAAC
CCGGACCAGC CGGCGCTGCG CAGCGAGCAG TCGGTCAACG AGCAGCGCGC CAGCAGTTCG
GGGCCGCAAG GTGTGCCTGG CGCGCTGAGC AACCAGCCGC CCGCAGGTGC AGCAGCGCCT
GAAAACGCCA CCGCCGCAGC CCCTGCTGCC GGTGCCATCC AGCCTGGCCA GCCGCTGGTG
GATGCCAACG GCCAGCAGAT CATGGACCCG GCCACCGGCC AGCCAATGCT CGCGCCATAC
CCTGCCGACA AGCGTCTGCA GACCACCAAG AACTTCGAGC TGGACCGCTC GATCAGCCAC
ACCCGCCAGC AGCAGGGTCG CCTGACTCGT CTGTCGGTGG CGGTAGTGGT CGATGACCAG
GTCAAGGTCG ACGCTGCCGG CGAGACCACC CGTGCGCCGT GGGGCGCCGA AGACCTGGCG
CGCTTCACCC GCCTGGTACA GGACGCCGTT GGCTTCGATG CCAGCCGTGG CGACAGCGTG
ACGGTGATCA ACGTGCCGTT CGCCGCCGAT CGCGGCGAAG AAATCGCCGA CATCGCGTTC
TATCAGCAGC CGTGGTTCTG GGACATCGTC AAGCAGGTGT TGGGCGTGGT GTTCATCCTG
GTACTGGTGT TCGGCGTGCT GCGCCCGGTA CTCAACAACA TCACTGGCGG CGGCAAGCAG
GCTGCTGCAA CGGACAGCGA CATGGAGCTG GGCGGCATGA TCGGTCTGGA TGGCGAACTG
GCCAACGACC GCGTCAGCCT GGGTGGCCCG ACAAGCATTC TGTTGCCAAG CCCGAGCGAG
GGTTACGAGG CACAGCTCAA CGCAATCAAA GGCCTGGTGG CCGAAGACCC GGGCCGTGTC
GCCCAGGTCG TGAAAGAGTG GATCAACGCC GATGAGTGA
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| Protein sequence | MAEAVVDNAP AKSGPPASKP PLFGMAFLEN ISQMPMLRQV GLLVGLAASV AIGFAVVLWS
QQPDYRPLYG SLAGMDTKQV MDTLAAADIP YNVEPNSGAL LVKADDLSRA RLKLAAAGVA
PSDGNVGFEL LDKEQGLGTS QFMEATRYRR SLEGELARTV SSLNNVKAAR VHLAIPKSSV
FVRDERKPSA SVLVELYPGR SLEAGQVMAI VNLVATSVPE LDKSQVTVVD QKGNLLSDQL
QDTALTMAGK QFDYSRRMEG MLTQRVHNIL QPVLGNDRYK AEVSADLDFS AVESTSEQFN
PDQPALRSEQ SVNEQRASSS GPQGVPGALS NQPPAGAAAP ENATAAAPAA GAIQPGQPLV
DANGQQIMDP ATGQPMLAPY PADKRLQTTK NFELDRSISH TRQQQGRLTR LSVAVVVDDQ
VKVDAAGETT RAPWGAEDLA RFTRLVQDAV GFDASRGDSV TVINVPFAAD RGEEIADIAF
YQQPWFWDIV KQVLGVVFIL VLVFGVLRPV LNNITGGGKQ AAATDSDMEL GGMIGLDGEL
ANDRVSLGGP TSILLPSPSE GYEAQLNAIK GLVAEDPGRV AQVVKEWINA DE
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