| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3683 |
|---|
| Symbol | fliN |
|---|
| ID | 6112642 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 4098178 |
|---|
| End bp | 4098642 |
|---|
| Gene Length | 465 bp |
|---|
| Protein Length | 154 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641623469 |
|---|
| Product | flagellar motor switch protein |
|---|
| Protein accession | YP_001750534 |
|---|
| Protein GI | 170722846 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1886] Flagellar motor switch/type III secretory pathway protein |
|---|
| TIGRFAM ID | [TIGR02480] flagellar motor switch protein FliN |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0262858 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAACG AAAACGAGAT CACCTCCCCG GAAGACCAGG CCCTGGCCGA TGAATGGGCG
GCGGCGCTGG AAGAAACCGG TGATGCCGGC CAGGCTGACA TCGATGCGCT GCTCGGTGGC
GACGGCGGTA GCGCCGGTGC CGGCCGGTTG CCGATGGAAG AGTTCGCAAG CTCGCCACGG
CCGAAAGAAA ACGTCAGCCT GGAAGGCCCG AACCTGGACG TGATCCTGGA CATCCCGGTG
AACATCTCCA TGGAAGTGGG CAGCACCGAG ATCAACATCC GCAACCTGCT GCAGCTCAAC
CAGGGCTCGG TGATCGAGCT CGACCGCCTG GCCGGTGAGC CGCTGGATGT GCTGGTCAAC
GGCACTTTGA TCGCCCACGG CGAAGTGGTT GTGGTCAACG AGAAGTTCGG CATCCGCCTG
ACTGACGTGA TCAGCCCCAG CGAACGTATC AAGAAGCTGC GCTGA
|
|---|
| Protein sequence | MANENEITSP EDQALADEWA AALEETGDAG QADIDALLGG DGGSAGAGRL PMEEFASSPR
PKENVSLEGP NLDVILDIPV NISMEVGSTE INIRNLLQLN QGSVIELDRL AGEPLDVLVN
GTLIAHGEVV VVNEKFGIRL TDVISPSERI KKLR
|
|---|
| |