Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_3664 |
Symbol | |
ID | 6112623 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 4077898 |
End bp | 4080117 |
Gene Length | 2220 bp |
Protein Length | 739 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641623450 |
Product | CheA signal transduction histidine kinase |
Protein accession | YP_001750515 |
Protein GI | 170722827 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0643] Chemotaxis protein histidine kinase and related kinases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.297315 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCTTCG GCGCCGATGA AGAAATCCTT CAGGATTTCC TGGTAGAAGC CGGCGAAATT CTTGAGCAAC TGTCCGAGCA ACTGGTCGAG CTGGAAAGCC GGCCCGATGA TGCCGACCTG CTCAATGCGA TCTTTCGCGG TTTCCACACT GTAAAAGGGG GCGCCGGCTT CCTCCAGCTC AATGAGCTGG TGGAGTGCTG CCATATCGCC GAGAACGTGT TCGACATCCT GCGCAAAGGT GAGCGCCGGG TCGACGCGGA ACTGATGGAC GTGGTGCTCG AAGCGCTGGA TACGGTCAAC AGCATGTTCG GCCAGGTGCG CGAGCGCAGT GAAGTGACCC CGGCTACGCC CGAATTGCTG GCGGCCTTGG CCCGCCTGGC CGAGCCGGGT AGCGCCGAAG CTGCTGCGCC GGTGGCCGAG GCTGCGCCTG CGCAGGCCGA GCCTGCCGCT GAGGCAGACA TCACCGACAC CGAATTCGAG CAGTTGCTCG ATTCGCTCGA TGCGGTCAAA GCCCAAGCAG CGGCTGCCGA ACAGCAGCTG CAGGGCGAAA CGTTGGCCGG CTCCGGTGAC GAGATCACCG ACGACGAATT CGAGTCGTTG CTTGACCAGT TGCACGGCAA GGGCCAGTTC TCGGCCGAAG TCGTTGCCAC AGAGCCCGTG GCCGCTGCAG CCAGCGCGCC AGCCAGCGAC GAAATCACCG ACGAAGAGTT CGAGTCGCTG CTGGATCAGC TGCACGGCAA GGGCACGTTC CAGGCGGACG CGCTGCCTGC TGCCGTTGCT CCGGTGGCCA GCGAAGTACC AGCTGCAGGT AGCGGCGACG AAATCAGCGA GCACGAGTTC GAGGCATTGC TCGATCAGTT GCATGGCAAA GGCAAGTTCA CCGGCGATGC CGTGACCGCT GAAGCGCCCG CCGCCGTTGC CACCCCTGTC GCAGCCAAGC CGCAAACCCA GCCTGTGGCC AAGCCGGCAC CGGCACCTGC TGCTGCGGCC AAGCCTGCCG CGCCGGCCCG CGCGCCCGCT CCTGCTGCCG AAAAACACGC AGTAAGCGAA GCGGAAACCA CCGTGCGCGT CGATACTGCG CGCCTGGACG AGATCATGAA TATGGTCGGC GAGCTGGTAC TGGTGCGTAA CCGCCTGGTG CGCCTGGGCC TGAACAGCGG TGACGAGGCC ATGTCCAAGG CCGTGTCGAA CCTCGATGTG GTCACTGCCG ACTTGCAGAC TGCGGTGATG AAGACCCGCA TGCAGCCGAT CAAGAAGGTC TTCGGCCGCT TCCCGCGCCT GGTCCGTGAC CTGGCCCGCC AGTTGAAGAA AGAGATCAAC CTGGAACTGG TCGGTGAAGA GACCGACCTG GACAAGAACC TGGTCGAGGC ATTGGCCGAC CCGCTGGTGC ACTTGGTGCG CAATGCGGTT GACCACGGTG TCGAAATGCC TGAAGAGCGT GAAGCCTCGG GCAAGGCGCG TACCGGCCGC GTGGTGCTGT CGGCCGAGCA GGAAGGCGAC CACATCCTGC TGTCTATTTC CGACGACGGC AAAGGCATGG ACCCTAACAT TCTGCGCGCC AAGGCCGTGG AAAAGGGCTT GATGGACAAG GATGCCGCCG ACCGTCTGAG CGAGTCGGAC TGCTACAACC TGATCTTCGC TCCGGGCTTC TCGACCAAGA CGGAAATCTC CGATGTGTCC GGCCGTGGTG TCGGTATGGA TGTGGTCAAG ACCAAGATTT CCCAGCTCAA CGGCTCGATC AACATCTTCT CGGCCAAAGG CCAGGGTTCG AAGATCGTCA TCAAGGTGCC GCTGACCCTG GCGATCATGC CGACCCTGAT GGTGATGCTG GGCAACCAGG CGTTCGCCTT CCCGCTGGTC AACGTCAACG AGATTTTCCA CCTGGACCTG TCGCGCACCA ACGTGGTCGA CGGCCAGGAG GTGGTGATCG TACGCGACAA GGCGCTGCCG CTGTTCTACC TCAAGCGCTG GCTGGTCCAG GGCCAGGTGC ATGAGGAGCA GCGCGAGGGC CATGTGGTGA TTCTGTCTGT GGGCACCCAG CGCATCGGCT TTGTGGTCGA CCAACTGGTG GGCCAGGAAG AGGTAGTGAT CAAGCCGCTG GGCAAGATGC TGCAGGGCAC CCCGGGCATG TCCGGCGCCA CCATCACCGG CGACGGTCGC ATTGCGCTGA TCCTCGACGT ACCGAGCATG CTCAAGCGTT ACGCGGCGCG GCGTATTTGA
|
Protein sequence | MSFGADEEIL QDFLVEAGEI LEQLSEQLVE LESRPDDADL LNAIFRGFHT VKGGAGFLQL NELVECCHIA ENVFDILRKG ERRVDAELMD VVLEALDTVN SMFGQVRERS EVTPATPELL AALARLAEPG SAEAAAPVAE AAPAQAEPAA EADITDTEFE QLLDSLDAVK AQAAAAEQQL QGETLAGSGD EITDDEFESL LDQLHGKGQF SAEVVATEPV AAAASAPASD EITDEEFESL LDQLHGKGTF QADALPAAVA PVASEVPAAG SGDEISEHEF EALLDQLHGK GKFTGDAVTA EAPAAVATPV AAKPQTQPVA KPAPAPAAAA KPAAPARAPA PAAEKHAVSE AETTVRVDTA RLDEIMNMVG ELVLVRNRLV RLGLNSGDEA MSKAVSNLDV VTADLQTAVM KTRMQPIKKV FGRFPRLVRD LARQLKKEIN LELVGEETDL DKNLVEALAD PLVHLVRNAV DHGVEMPEER EASGKARTGR VVLSAEQEGD HILLSISDDG KGMDPNILRA KAVEKGLMDK DAADRLSESD CYNLIFAPGF STKTEISDVS GRGVGMDVVK TKISQLNGSI NIFSAKGQGS KIVIKVPLTL AIMPTLMVML GNQAFAFPLV NVNEIFHLDL SRTNVVDGQE VVIVRDKALP LFYLKRWLVQ GQVHEEQREG HVVILSVGTQ RIGFVVDQLV GQEEVVIKPL GKMLQGTPGM SGATITGDGR IALILDVPSM LKRYAARRI
|
| |