Gene PputW619_3587 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_3587 
Symbol 
ID6112545 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp3989480 
End bp3991549 
Gene Length2070 bp 
Protein Length689 aa 
Translation table11 
GC content65% 
IMG OID641623373 
ProductDNA polymerase III subunits gamma and tau 
Protein accessionYP_001750438 
Protein GI170722750 
COG category[L] Replication, recombination and repair 
COG ID[COG2812] DNA polymerase III, gamma/tau subunits 
TIGRFAM ID[TIGR02397] DNA polymerase III, subunit gamma and tau 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTATC AGGTTCTTGC ACGTAAATGG CGTCCGCGCT CGTTCCGCGA AATGGTCGGC 
CAGGCCCATG TGCTCAAGGC CTTGATCAAT GCCTTGGACA ATCAGCGCCT GCACCACGCC
TACCTGTTCA CCGGTACCCG GGGCGTGGGC AAGACGACCA TCGCCCGTAT TATCGCCAAG
TGCCTGAACT GCGAAACCGG CATCACCTCC ACGCCATGTG GCACCTGTTC GGTGTGCCGT
GAAATCGACG AAGGCCGCTT CGTCGACCTG ATCGAGATCG ACGCCGCCAG CCGTACCAAG
GTCGAGGACA CCCGCGAACT GCTCGACAAC GTGCAGTACG CTCCCAGCCG CGGGCGCTTC
AAGGTCTACC TGATCGACGA AGTGCACATG CTGTCCACGC ACTCGTTCAA CGCCTTGCTC
AAGACGCTGG AAGAGCCACC GCCCTACGTC AAGTTCATCC TTGCCACCAC CGACCCGCAA
AAGCTGCCGG CCACCATCCT TTCGCGCTGT CTGCAGTTCT CGCTGAAGAA CATGAGCCCG
GAGCGGGTGG TCGAACACCT GAGCCACGTC CTGGAGGCCG AGAACGTTCC GTTCGAGCCT
GATGCCCTGT GGTTGCTTGG CCGCGCTGCC GATGGTTCGA TGCGTGACGC CATGAGCCTC
ACCGACCAGG CGATCGCGTT CGGCGAGGGC AGGGTGTTGG CCGCCGATGT GCGGGCCATG
CTCGGCAGCC TCGATCACGG CCAGGTCTAT GGTGTGCTGC AGGCGCTGCT GGAAGGGGAT
GCGCGGGCGT TGCTGGAGGC GGTGCGCAAC CTCGCCGAGC AGGGGCCGGA CTGGAGTGGC
GTGCTGGCCG AAATGCTCAA TGTGTTGCAC CGGGTCGCCA TCGCCCAAGC GCTGCCCGAG
GCGGTGGACA ATGGTCAGGG TGATCGCGAC CGAGTGCTGG CGCTGGCGTC GGCCTTGCCT
GCCGAAGATG TGCAGTTCTA TTACCAGATG GGCCTGATTG GTCGACGCGA CCTGCCCTTG
GCACCCGACC CGCGGGGCGG TTTCGAAATG GTCCTGCTGC GGATGCTGGC GTTCCGACCG
GCCGATAGCG ACGATGCGCC GAAACCGGTA CTAAAGCCGG TGGGGATCAG CCAGGCCACA
GCTGATCCTG CAACCCCCGT GGCAGCGCCT GCGGTGGTCC CCGAGGCGTC TGTCGCTGCC
GACGCAGTAC CCGCTGCAGT AGTTGCGGCC CCGCAAGCCG AGCCTGCGGC TGTCGTCGAG
GCAATGTCGG CTGTGCCACC ACAACCTGAG CCCAAGGCCG AGCTGGCCGA GCCCGAGCCG
GCACCGGAAG AGGAAGTCAT CGACCTGCCC TGGGAGGAGC CTGCTGCCAA GCCTGCCCCG
GTTGCCGTTA AGCCGGAGCC CGCGCCTGCG CCGGCTGCCG CGCCCCAGCC CCCAGTCGCC
GAGCCGCAAG ATGCCCAGCC GGCCTACGAC GAGCCGCCAT TCGATCCGTC TGCCTACGCC
TCGGCGGGCA TGGAGCGTGA TGACGAGCCG CCGATGGATG AAGATTACTA TGGCGGCGAA
AGTGACCCGG TGGGCTTCAG CTATCTGGAC GAACTGGTCG AGCACGTTCA GGAAGAGGCC
CCCATCGCTG CGCCTGAGCC GCTGCCGGCC GCCAAGCCCG CCACCGGCCT GGCCCTGCAA
TGGCTGGAAT TATTCCCACA GTTGCCTGTG TCCGGGATGA CAGGCAACAT CGCCGCAAAC
TGTACGCTGA TCGCTGCAGA CGGTGACGAC TGGCTGCTGC ACCTTGACCC GGGTCAGGGT
GCCTTGTTCA ACGCCACCCA GCAACGGCGC TTGAATGACG CGCTCAACCA GCACCTGGGG
CGCACGCTGA ACCTGCGCAT CGAGCTTATC CTGCCCGAGC AGGAAACCCC GGCCCAGGCA
GCCTCGCGCA AGCGTGCCGA GCGCCAGCAG GACGCCGTGG CGTCGATCGA GCAGGATCCG
TTGATCCAGC AGATGATCAA GCAGTTCGGC GCCACCGTGC GACAGGATAC TATTGAACCT
GTAGAAGCCC TGGTCAGTCA GGGTCAGTAA
 
Protein sequence
MSYQVLARKW RPRSFREMVG QAHVLKALIN ALDNQRLHHA YLFTGTRGVG KTTIARIIAK 
CLNCETGITS TPCGTCSVCR EIDEGRFVDL IEIDAASRTK VEDTRELLDN VQYAPSRGRF
KVYLIDEVHM LSTHSFNALL KTLEEPPPYV KFILATTDPQ KLPATILSRC LQFSLKNMSP
ERVVEHLSHV LEAENVPFEP DALWLLGRAA DGSMRDAMSL TDQAIAFGEG RVLAADVRAM
LGSLDHGQVY GVLQALLEGD ARALLEAVRN LAEQGPDWSG VLAEMLNVLH RVAIAQALPE
AVDNGQGDRD RVLALASALP AEDVQFYYQM GLIGRRDLPL APDPRGGFEM VLLRMLAFRP
ADSDDAPKPV LKPVGISQAT ADPATPVAAP AVVPEASVAA DAVPAAVVAA PQAEPAAVVE
AMSAVPPQPE PKAELAEPEP APEEEVIDLP WEEPAAKPAP VAVKPEPAPA PAAAPQPPVA
EPQDAQPAYD EPPFDPSAYA SAGMERDDEP PMDEDYYGGE SDPVGFSYLD ELVEHVQEEA
PIAAPEPLPA AKPATGLALQ WLELFPQLPV SGMTGNIAAN CTLIAADGDD WLLHLDPGQG
ALFNATQQRR LNDALNQHLG RTLNLRIELI LPEQETPAQA ASRKRAERQQ DAVASIEQDP
LIQQMIKQFG ATVRQDTIEP VEALVSQGQ