Gene PputW619_3550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_3550 
Symbol 
ID6112508 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp3941530 
End bp3942213 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content68% 
IMG OID641623337 
Producttwo component transcriptional regulator 
Protein accessionYP_001750402 
Protein GI170722714 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0188344 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGTTC TGCTCTGCGA GGACGACGAC CTGATCGCCA GCGGCATCTG CGCCGGCCTC 
ACCGCCCAAG GCCTGACCGT CGACCGCGTA GCCAACGCCG GTGCCGCCCG GGCCATGCTC
CAGGCGGCGC AGTTCGATGT GATGATCCTC GACCTTGGCC TGCCCGATGA AGACGGCCTC
AAGCTGTTGC GCCGCTTGCG TCAGCAGGGT ATCGATCTGC CGGTGCTGGT GCTCACCGCG
CGCGATGCGG TCACCGACCG GGTCGACGGC CTGCAGGCCG GTGCCGACGA CTACCTGCTC
AAGCCCTTCG ACCTGCGCGA GCTGGCCGCG CGTCTGCACA CCTTGCTGCG CCGGGTTGCC
GGGCGGGCGG TGAACGTGAT CGAGCATGGC CCGCTGCGCT ACGACCCCAG TAGCTGCGAA
GCGACCCTGG CCGGTCAGCC GGTCGACCTG TCGCGGCGTG AGCAGGCCTT GCTCCAGGCG
CTGCTGCAGA ACCCGGGCCG GGTGCTGTCC AGTGAACAGC TCAAGGACTG CGTGTACGGC
TTCAGCGACG AAGTCGAAAG CAACGCCCTC AACGTGCATA TCCATCACTT GCGCCGCAAG
CTTGGCAACA GCATCGTCGA GACCGTGCGC GGCCTGGGCT ACCGCCTTGG CCCGGCGCAG
GCGCCAGAGG AAGCCGCATC ATGA
 
Protein sequence
MHVLLCEDDD LIASGICAGL TAQGLTVDRV ANAGAARAML QAAQFDVMIL DLGLPDEDGL 
KLLRRLRQQG IDLPVLVLTA RDAVTDRVDG LQAGADDYLL KPFDLRELAA RLHTLLRRVA
GRAVNVIEHG PLRYDPSSCE ATLAGQPVDL SRREQALLQA LLQNPGRVLS SEQLKDCVYG
FSDEVESNAL NVHIHHLRRK LGNSIVETVR GLGYRLGPAQ APEEAAS