Gene PputW619_3530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_3530 
Symbol 
ID6112488 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp3890424 
End bp3891749 
Gene Length1326 bp 
Protein Length441 aa 
Translation table11 
GC content64% 
IMG OID641623317 
Productmajor facilitator transporter 
Protein accessionYP_001750382 
Protein GI170722694 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCCA TCGATACCGC TCGCCCGCCC CGGTTCAGCC GTGGCGACCA CCGGACCCTG 
GGCCTGGCGG CGCTGGGCGG CGCGCTGGAA ATCTATGATT TCATCATCTT CGTGTTCTTC
GCCCTGACCC TCAGCCAGCT GTTCTTCCCG CCCGAAATGC CTGAGTGGCT GCGCCTGCTG
CAAAGCTTCG GGATTTTCGT CACCGGCTAC CTGGCGCGGC CGCTCGGCGG CATCGTCATG
GCGCACTTCG CCGATCACCT GGGCCGCAAA CGGGTATTCA GCCTGAGCAT CCTGATGATG
GCACTGCCGT GCCTGCTGAT CGGGGTGATG CCGACCTATG CCGAGATTGG TTACGCGGCG
CCGCTGATCT TGCTGGCGTT GCGCATTCTG CAGGGCGCTG CGGTCGGTGG TGAGGTGCCC
AGTGCCTGGA CATTCGTTGC CGAACACGCA CCGCAAGGGC GGCGGGGTTA CGCTCTGGGC
TTCCTGCAGG CCGGGTTGAC CTTTGGCTAT TTGCTGGGGG CACTGACCGC GACACTGTTG
GCTCAGGTAT TTACCGCCCA GGAAATTCTC GATTACGCCT GGCGTTACCC GTTCCTGCTT
GGCGGGGTAT TTGGTGTGAT CGGCGTGTGG TTGCGCCGTT GGCTGAGTGA AACACCGGTG
TTTCTGGCCT TGCGCGAGCG CAAGGAGCAG CCGGTGAAGT TCCCGCTGCG ACGGGTGCTG
GGCGAGCATC GTGGGGCGTT GGTCCCGGCT GCGCTGCTGA CCTGCGTGCT GACCTCGGCG
GTGGTGGTGC TGGTGGTGAT CACACCGACG GTAATGCAGC AGCGCTTCGG CATGACCGCC
GCGCACACTT TCGCCCTGAG CAGCGTAGGC ATCGTCTTTC TCAATATCGG TTGTGTGCTG
GCCGGGCTGC TGGTCGATCG CCTGGGCGCC TGGCGGGCGC TGATGATCTA CAGCGTGCTG
CTGCCGCTGG GTATCGGTGC CTTGTATGCG AGCCTGGTGG GGCAGTGGGG CATGACGTGG
CTGGCTTACG CGTTGGCTGG GCTGTGCTGT GGTGTGGTGG GGGTGGTGCC GTCGGTCATG
GTCGGGCTGT TCCCGGCGCA GATCCGGGTG TCGGGCATTT CCTTTACCTA CAACGTGGCT
TATGCCTTGT GGGCCAGTAC CACGCCGCTG GCGTTGATAG CGTTGATGCC GTGGAGCCCG
TGGGTCTGTG TGGGCTTTTG TCTGATCATG GGCGCGGTGG GGCTGCTCAC GGCCCTGTAC
TTTGGGCGTC GGGAGCCTTT GGCGGTCGCG GCGGAGCCAA TGCCGATCAT GTGCGGTGAC
AAATGA
 
Protein sequence
MTAIDTARPP RFSRGDHRTL GLAALGGALE IYDFIIFVFF ALTLSQLFFP PEMPEWLRLL 
QSFGIFVTGY LARPLGGIVM AHFADHLGRK RVFSLSILMM ALPCLLIGVM PTYAEIGYAA
PLILLALRIL QGAAVGGEVP SAWTFVAEHA PQGRRGYALG FLQAGLTFGY LLGALTATLL
AQVFTAQEIL DYAWRYPFLL GGVFGVIGVW LRRWLSETPV FLALRERKEQ PVKFPLRRVL
GEHRGALVPA ALLTCVLTSA VVVLVVITPT VMQQRFGMTA AHTFALSSVG IVFLNIGCVL
AGLLVDRLGA WRALMIYSVL LPLGIGALYA SLVGQWGMTW LAYALAGLCC GVVGVVPSVM
VGLFPAQIRV SGISFTYNVA YALWASTTPL ALIALMPWSP WVCVGFCLIM GAVGLLTALY
FGRREPLAVA AEPMPIMCGD K