| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3512 |
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| Symbol | sucA |
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| ID | 6112470 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 3872456 |
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| End bp | 3875287 |
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| Gene Length | 2832 bp |
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| Protein Length | 943 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641623299 |
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| Product | 2-oxoglutarate dehydrogenase E1 component |
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| Protein accession | YP_001750364 |
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| Protein GI | 170722676 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0567] 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes |
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| TIGRFAM ID | [TIGR00239] 2-oxoglutarate dehydrogenase, E1 component |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.679616 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGAAA GCGTGATGCA GCGCATGTGG GAAAGCGCCC ACCTTTCAGG TGGTAACGCT
GCATATGTGG AAGAGCTCTA CGAGCTCTAC CTGCACGACC CTAACGCTGT GCCAGAAGAG
TGGCGCACTT ACTTCCAGAA GTTGCCCGCC GACGGCAGCA CCGCTACCGA TGTATCGCAC
TCGACAATCC GCGACCATTT CGTACTGCTG GCAAAGAACC AGCGCCGCGC CCAACCGGTA
TCTGCCGGGA GCGTGAGCAG TGAACACGAG AAGAAGCAGG TTGAAGTTCT GCGACTGATC
CAGGCCTATC GTATGCGCGG CCATCAGGCT GCCAAGCTCG ACCCCTTGGG GTTGTGGCAG
CGCCCTGCGC CCGTAGACCT GTCGATCAAT CACTACGGCT TGACCAATGC CGATCTTGAT
ACGACCTTCC GTGCCGGCGA CCTGTACATC GGCAAAGAGG AAGCGAGCCT ACGCGAGATC
GTCGAGGCGC TCCAGAAGAC ATATTGTCGC ACCATTGGCG CCGAGTTCAC CCACATCGTC
GATTCCGAGC AGCGCAGCTG GTTCCAGCAG CGCCTGGAAA GCGTGCGCGG CCGTCCGGAC
TTCTCCGCCG ACGTGCAGGC CCACCTGCTT GAGCGCGTGA CGGCCGGTGA AGGTCTCGAG
AAGTACCTGG GCACCAAGTA CCCGGGGACC AAACGTTTCG GCCTTGAGGG TGGCGAAAGC
CTGATCCCGA TGCTGGACGA AATGATCCAG CGGTCCGGCT CCTACGGCAC CAAGGAAGTC
GTGATCGGCA TGGCCCACCG CGGCCGTCTG AACGTGCTGG TCAACACCTT CGGCAAGAAC
CCGCGCGAGC TGTTCGACGA GTTCGAAGGC AAGAAGATGA ACGAGCTGGG CTCCGGTGAC
GTGAAGTATC ACCAGGGCTT CTCCTCGAAC GTGATGACCA CCGGTGGCGA AGTTCACCTG
GCCATGGCGT TCAACCCGTC ACACCTGGAA ATCGTCTCCC CGGTGGTCGA AGGTTCGGTG
CGCGCCCGTC AGGACCGCCG CAACGATACC GCCGGCGACA AGGTGCTGCC GATCTCGATC
CACGGTGACG CTGCCTTCGC AGGCCAGGGC GTGGTCATGG AAACCTTCCA GATGTCGCAG
ACCCGCGGTT TCAAGACCGG CGGTACCGTG CACATCGTGA TCAACAACCA GGTTGGTTTC
ACCATCAGCA ACCCGCTGGA CTCGCGTTCC ACCGAGTACG CCACCGACGT TGCCAAGATG
ATCCAGGCTC CGATCCTGCA CGTGAACGGC GATGACCCGG AAGCGGTGCT GTTCGTGACC
CAGCTGGCCA TCGATTACCG CATGCAGTTC AAGCGTGACG TGGTCATCGA CCTGGTCTGC
TACCGTCGTC GCGGCCACAA CGAGGCCGAC GAGCCCAACG GTACCCAGCC GCTGATGTAT
CAGCAGATCA GCAAGCAGCG CACCACCCGT GAGCTGTACG CCGAGGCGCT GATCCAGGCC
GGTCGCATCG ATGCCGAGCG CGCCCAGGCC AAGATCGACG AGTACCGCAA TGCTCTGGAC
AACGGCCTGC ACGTGGTCAA GAGCCTGGTC AAGGAGCCGA ACCGCGAGCT GTTCGTCGAC
TGGCGTCCGT ACCTGGGCCA CGCCTGGACT GCGCGTCACG ACACCCGTTT CGACCTCAAG
ACCCTGCAGG ACCTGTCGGC CAAGCTCCTC GAGCTGCCGG AAGGCTTCGT CGTCCAGCGT
CAGGTGTCGA AGATCTACGA AGACCGTCAG AAGATGCAGG CCGGTGGCTT GCCGATCAAC
TGGGGTTACG CAGAGACCAT GGCGTACGCC ACCCTGCAGT TCGAAGGTCA CCCGATCCGC
ATGACTGGCC AGGACATCGG CCGTGGCACC TTCTCGCACC GCCACGCGGT GTTGCACAAC
CAGAAGGATG CCAGCACTTA CGTGCCGCTG CAGAACCTGT TCCCGGGCCA GCCGCGCTTC
GACCTGTACG ACTCCTTCCT GTCGGAAGAA GCGGTACTGG CCTTCGAATA CGGCTACTCG
ACCACCACGC CGAATGCGCT GGTGATCTGG GAAGCACAGT TCGGCGACTT CGCCAACGGT
GCGCAGGTGG TGATCGACCA GTTCATCACC AGCGGTGAGC ACAAGTGGGG TCGCCTGTGC
GGTCTGACCA TGCTGCTGCC GCACGGTTAC GAAGGGCAGG GCCCGGAGCA CTCCTCCGCG
CGTCTGGAGC GTTACCTGCA GCTGTGCGCC GAGCACAACA TCCAGGTCTG CGTACCGACC
ACCCCGGCAC AGATCTACCA CCTGCTGCGT CGTCAGGTCA TCCGTCCGCT GCGCAAGCCG
CTGATCGTGC TGACGCCCAA GTCGCTGCTG CGCCACAAGC TGGCCGTCTC GACCCTGGAG
GACCTTGCAG AAGGTTCGTT CCAGACCGTG ATCCCGGAAA TCGACACCCT GGATCCTGCC
AAGGTCGAAC GCCTGGTGCT GTGTGGTGGC AAGGTCTATT ACGACCTGCT GGAAAAGCGC
CGTGCCGAAG GCCGCGAAGA CATCGCAATC GTGCGTATCG AGCAGCTGTA CCCGTTCCCG
GAAGACGACC TGGTCGACAT CCTGGCGCCG TACACCAACC TCAAGCATGC CGTCTGGTGT
CAGGAAGAGC CGATGAACCA GGGCGCCTGG TACAGCAGTC AGCACCACAT GCGCCGTATC
CTGGGCCGCC ACAACAAGGC GCTGGTCCTG GAATACGCCG GCCGCGACGC TTCCGCCGCG
CCAGCTTGTG GTTACGCTTC GAAGCACGCC GAACAGCAGG AAAAACTGCT GCAAGACGCC
TTCACTGTCT AA
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| Protein sequence | MQESVMQRMW ESAHLSGGNA AYVEELYELY LHDPNAVPEE WRTYFQKLPA DGSTATDVSH
STIRDHFVLL AKNQRRAQPV SAGSVSSEHE KKQVEVLRLI QAYRMRGHQA AKLDPLGLWQ
RPAPVDLSIN HYGLTNADLD TTFRAGDLYI GKEEASLREI VEALQKTYCR TIGAEFTHIV
DSEQRSWFQQ RLESVRGRPD FSADVQAHLL ERVTAGEGLE KYLGTKYPGT KRFGLEGGES
LIPMLDEMIQ RSGSYGTKEV VIGMAHRGRL NVLVNTFGKN PRELFDEFEG KKMNELGSGD
VKYHQGFSSN VMTTGGEVHL AMAFNPSHLE IVSPVVEGSV RARQDRRNDT AGDKVLPISI
HGDAAFAGQG VVMETFQMSQ TRGFKTGGTV HIVINNQVGF TISNPLDSRS TEYATDVAKM
IQAPILHVNG DDPEAVLFVT QLAIDYRMQF KRDVVIDLVC YRRRGHNEAD EPNGTQPLMY
QQISKQRTTR ELYAEALIQA GRIDAERAQA KIDEYRNALD NGLHVVKSLV KEPNRELFVD
WRPYLGHAWT ARHDTRFDLK TLQDLSAKLL ELPEGFVVQR QVSKIYEDRQ KMQAGGLPIN
WGYAETMAYA TLQFEGHPIR MTGQDIGRGT FSHRHAVLHN QKDASTYVPL QNLFPGQPRF
DLYDSFLSEE AVLAFEYGYS TTTPNALVIW EAQFGDFANG AQVVIDQFIT SGEHKWGRLC
GLTMLLPHGY EGQGPEHSSA RLERYLQLCA EHNIQVCVPT TPAQIYHLLR RQVIRPLRKP
LIVLTPKSLL RHKLAVSTLE DLAEGSFQTV IPEIDTLDPA KVERLVLCGG KVYYDLLEKR
RAEGREDIAI VRIEQLYPFP EDDLVDILAP YTNLKHAVWC QEEPMNQGAW YSSQHHMRRI
LGRHNKALVL EYAGRDASAA PACGYASKHA EQQEKLLQDA FTV
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