Gene PputW619_3510 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_3510 
Symbol 
ID6112468 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp3869678 
End bp3871114 
Gene Length1437 bp 
Protein Length478 aa 
Translation table11 
GC content60% 
IMG OID641623297 
Productdihydrolipoamide dehydrogenase 
Protein accessionYP_001750362 
Protein GI170722674 
COG category[C] Energy production and conversion 
COG ID[COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes 
TIGRFAM ID[TIGR01350] dihydrolipoamide dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0716172 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.572392 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCAGA AATTCGACGT AGTGGTGATT GGTGCAGGTC CTGGCGGTTA TGTGGCTGCC 
ATCAAGGCTG CCCAACTTGG TCTGAAGACT GCCTGTATCG AGAAGTACAC CGACGCCGAG
GGCAAGCTGG CCCTGGGTGG CACCTGCCTG AACGTAGGTT GCATTCCGTC CAAGGCGCTG
CTGGACAGCT CCTGGAAGTA CAAGGAAGCC AAAGAGAGCT TCAACGTCCA CGGCATCTCC
ACTGGCGAAG TGAAGATGGA CGTGGCCGCG ATGGTTGGTC GCAAGGCTGG CATCGTCAAG
AACCTGACCG GTGGCGTTGC CACCCTGTTC AAGGCCAATG GCGTCACTTC GATCCAGGGC
CACGGCAAAC TGCTGGCTGG CAAGAAAGTC GAAGTCACCA AGGCTGATGG CACCACTGAA
ATCATCGAAG CCGAGAACGT GATCCTGGCC TCCGGCTCGC GTCCGATCGA CATTCCGCCG
GCTCCGGTCG ACCAGAACGT CATCGTCGAC TCCACCGGCG CCCTGGAATT CCAAGCGGTT
CCCAAGCGCC TGGGCGTGAT CGGTGCCGGC GTCATCGGCC TGGAACTTGG CTCGGTGTGG
GCTCGCCTGG GTGCTGAAGT CACCGTCCTG GAAGCCCTGG ACACCTTCCT GATGGCTGCT
GACACCGCAG TCTCGAAAGA AGCCCAGAAG ACCCTGACCA AGCAAGGCCT GGATATCAAG
CTGGGTGCTC GCGTCACTGG CTCGAAAGTC AATGGCAACG AAGTCGAAGT GACCTACACC
AACGCCGAAG GCGAGCAGAA GATCACCTTC GACAAGCTGA TCGTCGCGGT CGGCCGTCGC
CCGGTGACCA CCGACCTGCT GGCCTCCGAC AGCGGCGTGA ACATCGACGA GCGTGGCTAC
ATCTTCGTTG ACGATCACTG CGCTACCAGC GTTCCGGGCG TCTATGCCAT CGGTGACGTT
GTCCGCGGCA TGATGCTGGC GCACAAGGCC TCGGAAGAGG GCATCATGGT CGTCGAGCGC
ATCAAGGGCC ACAAAGCCCA GATGAACTAC GACCTGATCC CTTCGGTTAT CTACACCCAC
CCGGAAATCG CGTGGGTCGG CAAGACCGAA CAAGCCTTGA AGGCCGAGGG TGTTGAGGTT
AACGTAGGCA CCTTCCCGTT CGCGGCCAGC GGCCGTGCGA TGGCGGCCAA CGACACCGGT
GGTTTCGTCA AGGTCATCGC TGATGCCAAG ACCGACCGCG TACTGGGTGT ACACGTGATT
GGCCCGTCGG CTGCCGAACT GGTTCAGCAG GGCGCGATCG CAATGGAATT CGGCACCAGT
GCCGAGGATC TGGGCATGAT GGTCTTCAGC CATCCAACCC TGTCCGAAGC GTTGCATGAA
GCAGCGCTGG CAGTGAATGG CGGCGCCATT CACGTGGCCA ACCGTAAGAA GCGTTAA
 
Protein sequence
MTQKFDVVVI GAGPGGYVAA IKAAQLGLKT ACIEKYTDAE GKLALGGTCL NVGCIPSKAL 
LDSSWKYKEA KESFNVHGIS TGEVKMDVAA MVGRKAGIVK NLTGGVATLF KANGVTSIQG
HGKLLAGKKV EVTKADGTTE IIEAENVILA SGSRPIDIPP APVDQNVIVD STGALEFQAV
PKRLGVIGAG VIGLELGSVW ARLGAEVTVL EALDTFLMAA DTAVSKEAQK TLTKQGLDIK
LGARVTGSKV NGNEVEVTYT NAEGEQKITF DKLIVAVGRR PVTTDLLASD SGVNIDERGY
IFVDDHCATS VPGVYAIGDV VRGMMLAHKA SEEGIMVVER IKGHKAQMNY DLIPSVIYTH
PEIAWVGKTE QALKAEGVEV NVGTFPFAAS GRAMAANDTG GFVKVIADAK TDRVLGVHVI
GPSAAELVQQ GAIAMEFGTS AEDLGMMVFS HPTLSEALHE AALAVNGGAI HVANRKKR