| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3423 |
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| Symbol | |
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| ID | 6112376 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 3767298 |
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| End bp | 3769262 |
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| Gene Length | 1965 bp |
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| Protein Length | 654 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641623206 |
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| Product | DNA topoisomerase III |
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| Protein accession | YP_001750276 |
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| Protein GI | 170722588 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01056] DNA topoisomerase III, bacteria and conjugative plasmid |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCTGT TCCTCTGCGA AAAACCCTCC CAGGCAAAAG ACATCGCCAA GATCCTTGGC
GCCAACCGCA AGGGCGACGG CTGCTGGCAA GGCACCGACG TCTGCGTCAC CTGGTGCATA
GGCCACCTGT TGGAAACCGC TCCGCCTGAC AGCTACGACG AACGTTACAA GCGCTGGAAC
CTCGCCGACC TGCCGATCAT TCCGGAAAAG TGGAAGATGC TGGTCAAACC CAAGACTGCC
AGCCAGTTCA AGGCCGTCAA GCGCCTGCTC GGCGAAGCAC GAGAACTGGT AATCGCCACC
GATGCCGACC GCGAAGGCGA AATGATCGCC CGCGAGCTGG TCGAACATTG TCGCTACCGT
GGGCCCATTC AGCGCCTGTG GCTGTCCGCA CTGGACGATG CCTCGATTCG CAAGGCCCTT
GCGCGTCTGT TGCCGGGGCA GGACACCTTC AACCTCTATC ACTCGGCGCT CGGCCGCTCA
CGCGCCGACT GGCTCATAGG CATGAACATG AGCAGGCTTT TCACCCTGTT GGGCCGCCAG
TCCGGCTATC AGGGTGTGCT ACCGGTGGGC CGGGTACAAA CACCCACCCT GCGCCTGGTG
GTGGACCGCG ACCGCAGCAT CGCTGATTTC GTACCGGTAC CGTTCTGGGC CATCGAGGTG
CAACTCGAGC ATGCCGGCCT GGTCTTCAAT GCACAATGGC GGGCCCCGGA GGGCATCTGT
GACGACCAGG GCCGCTGCCT TAACCAGGCG CTGGCCCAAC AGGCCGCCAC AGACATCGGG
AACGCCCGCT CCGCACGGGT GCTCAAGGTG ACCACCGAAC GCGTACGCGA GGCAGCACCC
CTGCCCTTCG ACCTCGGCAC CCTGCAGGAA TTGTGCTCAA AGAAATTCGG CCTTGGCGCC
CAGGAAACCC TCGACATTGC CCAGGCCCTG TACGAAACCC ACAAGCTGAT CACTTACCCA
CGGAGCGACT GCGGCTACCT GCCCGTCAGC CAGCACAGCG AAGCGCCGGC AATCCTCACT
GCATTGCAGC GCGTCGATAG CAGCCTGGCG CCGTTGCAAG CGCACCTTGA GCCGCAGCGC
CGCTCGCGGG CCTGGAACGA TGCCAAAGTT ACCGCGCACC ACGGCATCAT CCCTACCGCG
GCCGCCAGCG ACCCGTCGCG CTTGCCTGCC AAGCACAAGG CGGTCTATAC CCTGATCCGT
GCCCGTTACC TGGCCCAGTT CCTGCCCAAC CACGAGTACG ATCGAACCCA GGCCGAGTTC
GACTGTGCAG GCCATGCCCT GCGCGCCGTG GGCAAGCAGA TCGTGGAGCC GGGCTGGCGT
CGCGCATTAC CCGAAGCGCT GGCCCCGGCC AAGGGTCGCG AAGCCCCGCC GGCGCAGGTC
CTGCCAACAT TGTGTGAAAG TCAGGACTGC TCCGTACAGG GCCTGCAGTT GAAGGACCTC
TGGACCCAAC CGCCCAAACC CTTCACCGAA GGCGACCTGA TCAAAGCCAT GAAGAACGTC
GCCAAGCTGG TGGACGACCC GCGGCTGAAA CAGAAGCTCA AGGAAACCAC CGGCATCGGT
ACTGAGGCGA CCCGTGCCAG CATCATCCAG GGCCTGCTCG ACCGGGGCTA TCTGGTCAAG
AACGGCAAGG CACTGGCGGC CACCCCAGCC GCATTCAGCC TGATCGACGC CGTGCCACGC
GCCATCGCCG ACCCAGGTAC CACGGCAATC TGGGAGCAGG CGCTGGACAT GGTGCAAAGT
GGTGAAATGA GCCTGGAGGA CTTCGTTGCG CGGCAGTCGG CATGGATGGG TAAGCTGGTG
GAGCGCTGCA GCGGCATGCG CATGACCATA AACGGGCCAG CGGTGGGCAA GGCGGCGCCG
TGGAAGAAAA AGCGCAGGAA CGGGGGCAAA GGCAAGCTTG CAGCGAGCGG TGCCAAGACC
ACGGCCAGCA AGCCGCGACA GCCTCGGCGC AAGGCCCCCA ACTGA
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| Protein sequence | MRLFLCEKPS QAKDIAKILG ANRKGDGCWQ GTDVCVTWCI GHLLETAPPD SYDERYKRWN
LADLPIIPEK WKMLVKPKTA SQFKAVKRLL GEARELVIAT DADREGEMIA RELVEHCRYR
GPIQRLWLSA LDDASIRKAL ARLLPGQDTF NLYHSALGRS RADWLIGMNM SRLFTLLGRQ
SGYQGVLPVG RVQTPTLRLV VDRDRSIADF VPVPFWAIEV QLEHAGLVFN AQWRAPEGIC
DDQGRCLNQA LAQQAATDIG NARSARVLKV TTERVREAAP LPFDLGTLQE LCSKKFGLGA
QETLDIAQAL YETHKLITYP RSDCGYLPVS QHSEAPAILT ALQRVDSSLA PLQAHLEPQR
RSRAWNDAKV TAHHGIIPTA AASDPSRLPA KHKAVYTLIR ARYLAQFLPN HEYDRTQAEF
DCAGHALRAV GKQIVEPGWR RALPEALAPA KGREAPPAQV LPTLCESQDC SVQGLQLKDL
WTQPPKPFTE GDLIKAMKNV AKLVDDPRLK QKLKETTGIG TEATRASIIQ GLLDRGYLVK
NGKALAATPA AFSLIDAVPR AIADPGTTAI WEQALDMVQS GEMSLEDFVA RQSAWMGKLV
ERCSGMRMTI NGPAVGKAAP WKKKRRNGGK GKLAASGAKT TASKPRQPRR KAPN
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