Gene PputW619_3418 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_3418 
SymbolmnmA 
ID6112371 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp3762050 
End bp3763174 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content63% 
IMG OID641623201 
ProducttRNA-specific 2-thiouridylase MnmA 
Protein accessionYP_001750271 
Protein GI170722583 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain 
TIGRFAM ID[TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGCC CAGCACTCAA AGACCCCGCC AAGACCCGCG TCATCGTCGG CATGTCCGGC 
GGCGTGGACT CTTCCGTCTC CGCCCTTCTG CTCATGGAGC AGGGCTATCA GGTGGAAGGT
CTGTTCATGA AGAACTGGGA AGAAGACGAC GGCACCGAAT ACTGCACTGC CCGTGAAGAC
TTGGCCGACG CCCAGGCTGT GTGCGACCGC ATCGGCATCA AACTGCACAC CGCCAACTTT
GCCGCCGAAT ACTGGGACAA CGTCTTCGAG CACTTCCTCG AAGAATACAA GGCCGGCCGC
ACACCCAACC CGGACATCCT CTGCAACCGC GAAATCAAGT TCAAAGCTTT CCTCGACTAC
GCGCTGTCGC TGGGGGCTGA CCTGATCGCC ACCGGCCATT ACGTGCGCCG CCGCGACACC
GGCGCGGTCA CCGAGCTGCT CAAGGGCCTG GACCCGAACA AGGACCAGAG CTACTTCCTG
CATGCCGTCG GCGGCAAGGA AATCGCCCGC ACCCTGTTCC CTGTCGGCGA ACTGGAAAAG
CCAGAAGTTC GCGCCATCGC CGAAAAGCAC GGTCTGGCCA CTGCCAAGAA AAAGGACTCC
ACCGGTATCT GCTTCATCGG TGAGCGCCGC TTCAGCGACT TCCTCAAGCA GTACCTGCCG
GCCCAACCAG GTGAGATACA GACCACCGAA GGCGAAGTCA TCGGCCGCCA CCACGGCCTG
ATGTACCACA CCATTGGCCA GCGCCAGGGC TTGGGTATTG GCGGCCTGAA AGACGCCGGC
GACGAGCCGT GGTATGTGCT GCACAAAGAC CTGACCCGCA ATGTGCTGGT GGTCGGCCAG
GGCAACGAAC ACCCTTGGTT GTTCTCCCGC GCCCTGCTCG CCTCGGAGAT CTTCTGGGTC
AACCCGATCG ACCTCAGCAG CCCGCGCACG CTCACCGCCA AGGTGCGCTA CCGTCAGAGC
GACCAGCGCT GCACCCTGGC GCTGACCGAA AGCGGCTACC GCGCCGTGTT CGACGAGCCG
CAGCGCGCCG TTACCCCTGG CCAGTCGGTA GTGTTCTACG ACGGCGAAGT GTGCCTGGGC
GGCGGTGTGA TTGAGACGGC CGAGCCGTGG AGCCCGCGCG CATGA
 
Protein sequence
MTSPALKDPA KTRVIVGMSG GVDSSVSALL LMEQGYQVEG LFMKNWEEDD GTEYCTARED 
LADAQAVCDR IGIKLHTANF AAEYWDNVFE HFLEEYKAGR TPNPDILCNR EIKFKAFLDY
ALSLGADLIA TGHYVRRRDT GAVTELLKGL DPNKDQSYFL HAVGGKEIAR TLFPVGELEK
PEVRAIAEKH GLATAKKKDS TGICFIGERR FSDFLKQYLP AQPGEIQTTE GEVIGRHHGL
MYHTIGQRQG LGIGGLKDAG DEPWYVLHKD LTRNVLVVGQ GNEHPWLFSR ALLASEIFWV
NPIDLSSPRT LTAKVRYRQS DQRCTLALTE SGYRAVFDEP QRAVTPGQSV VFYDGEVCLG
GGVIETAEPW SPRA