Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_3418 |
Symbol | mnmA |
ID | 6112371 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 3762050 |
End bp | 3763174 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641623201 |
Product | tRNA-specific 2-thiouridylase MnmA |
Protein accession | YP_001750271 |
Protein GI | 170722583 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAGCC CAGCACTCAA AGACCCCGCC AAGACCCGCG TCATCGTCGG CATGTCCGGC GGCGTGGACT CTTCCGTCTC CGCCCTTCTG CTCATGGAGC AGGGCTATCA GGTGGAAGGT CTGTTCATGA AGAACTGGGA AGAAGACGAC GGCACCGAAT ACTGCACTGC CCGTGAAGAC TTGGCCGACG CCCAGGCTGT GTGCGACCGC ATCGGCATCA AACTGCACAC CGCCAACTTT GCCGCCGAAT ACTGGGACAA CGTCTTCGAG CACTTCCTCG AAGAATACAA GGCCGGCCGC ACACCCAACC CGGACATCCT CTGCAACCGC GAAATCAAGT TCAAAGCTTT CCTCGACTAC GCGCTGTCGC TGGGGGCTGA CCTGATCGCC ACCGGCCATT ACGTGCGCCG CCGCGACACC GGCGCGGTCA CCGAGCTGCT CAAGGGCCTG GACCCGAACA AGGACCAGAG CTACTTCCTG CATGCCGTCG GCGGCAAGGA AATCGCCCGC ACCCTGTTCC CTGTCGGCGA ACTGGAAAAG CCAGAAGTTC GCGCCATCGC CGAAAAGCAC GGTCTGGCCA CTGCCAAGAA AAAGGACTCC ACCGGTATCT GCTTCATCGG TGAGCGCCGC TTCAGCGACT TCCTCAAGCA GTACCTGCCG GCCCAACCAG GTGAGATACA GACCACCGAA GGCGAAGTCA TCGGCCGCCA CCACGGCCTG ATGTACCACA CCATTGGCCA GCGCCAGGGC TTGGGTATTG GCGGCCTGAA AGACGCCGGC GACGAGCCGT GGTATGTGCT GCACAAAGAC CTGACCCGCA ATGTGCTGGT GGTCGGCCAG GGCAACGAAC ACCCTTGGTT GTTCTCCCGC GCCCTGCTCG CCTCGGAGAT CTTCTGGGTC AACCCGATCG ACCTCAGCAG CCCGCGCACG CTCACCGCCA AGGTGCGCTA CCGTCAGAGC GACCAGCGCT GCACCCTGGC GCTGACCGAA AGCGGCTACC GCGCCGTGTT CGACGAGCCG CAGCGCGCCG TTACCCCTGG CCAGTCGGTA GTGTTCTACG ACGGCGAAGT GTGCCTGGGC GGCGGTGTGA TTGAGACGGC CGAGCCGTGG AGCCCGCGCG CATGA
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Protein sequence | MTSPALKDPA KTRVIVGMSG GVDSSVSALL LMEQGYQVEG LFMKNWEEDD GTEYCTARED LADAQAVCDR IGIKLHTANF AAEYWDNVFE HFLEEYKAGR TPNPDILCNR EIKFKAFLDY ALSLGADLIA TGHYVRRRDT GAVTELLKGL DPNKDQSYFL HAVGGKEIAR TLFPVGELEK PEVRAIAEKH GLATAKKKDS TGICFIGERR FSDFLKQYLP AQPGEIQTTE GEVIGRHHGL MYHTIGQRQG LGIGGLKDAG DEPWYVLHKD LTRNVLVVGQ GNEHPWLFSR ALLASEIFWV NPIDLSSPRT LTAKVRYRQS DQRCTLALTE SGYRAVFDEP QRAVTPGQSV VFYDGEVCLG GGVIETAEPW SPRA
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