Gene PputW619_3414 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_3414 
Symbol 
ID6112367 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp3757214 
End bp3757465 
Gene Length252 bp 
Protein Length83 aa 
Translation table11 
GC content55% 
IMG OID641623197 
Productcold-shock DNA-binding domain-containing protein 
Protein accessionYP_001750267 
Protein GI170722579 
COG category[K] Transcription 
COG ID[COG1278] Cold shock proteins 
TIGRFAM ID[TIGR02381] cold shock domain protein CspD 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0959818 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAGCG GTAAAGTCAA GTGGTTCAAC AATGCCAAGG GCTACGGATT CATCAATGAA 
GACGGCAAAA CCGACGACCT GTTCGCCCAT TATTCGGCGA TCAAGATGGA CGGTTACAAA
ACCCTCAAGG CCGGACAAGC CGTGACTTTC GAGATCGTTC AGGGCCCCAA GGGCCTGCAT
GCGACCGAAA TCGCCAACGC TATTGCCAGC ACCTCAACGG GGGCCTCGCA ATCATCGACC
GCTGAAGCCT GA
 
Protein sequence
MASGKVKWFN NAKGYGFINE DGKTDDLFAH YSAIKMDGYK TLKAGQAVTF EIVQGPKGLH 
ATEIANAIAS TSTGASQSST AEA