Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_3414 |
Symbol | |
ID | 6112367 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 3757214 |
End bp | 3757465 |
Gene Length | 252 bp |
Protein Length | 83 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641623197 |
Product | cold-shock DNA-binding domain-containing protein |
Protein accession | YP_001750267 |
Protein GI | 170722579 |
COG category | [K] Transcription |
COG ID | [COG1278] Cold shock proteins |
TIGRFAM ID | [TIGR02381] cold shock domain protein CspD |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.0959818 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAGCG GTAAAGTCAA GTGGTTCAAC AATGCCAAGG GCTACGGATT CATCAATGAA GACGGCAAAA CCGACGACCT GTTCGCCCAT TATTCGGCGA TCAAGATGGA CGGTTACAAA ACCCTCAAGG CCGGACAAGC CGTGACTTTC GAGATCGTTC AGGGCCCCAA GGGCCTGCAT GCGACCGAAA TCGCCAACGC TATTGCCAGC ACCTCAACGG GGGCCTCGCA ATCATCGACC GCTGAAGCCT GA
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Protein sequence | MASGKVKWFN NAKGYGFINE DGKTDDLFAH YSAIKMDGYK TLKAGQAVTF EIVQGPKGLH ATEIANAIAS TSTGASQSST AEA
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