Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_3407 |
Symbol | lolA |
ID | 6112360 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 3748931 |
End bp | 3749566 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641623190 |
Product | outer-membrane lipoprotein carrier protein |
Protein accession | YP_001750260 |
Protein GI | 170722572 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2834] Outer membrane lipoprotein-sorting protein |
TIGRFAM ID | [TIGR00547] periplasmic chaperone LolA |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.315594 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCGCGA TTCGCATGCT GTTGGTTTCT GCCCTGACCC TGGGTTCGTT ATCGGCCACA CTGTCGGCTC ACGCTGGTGA GCAGGACGTG CAGCGCCTGA CCCAGTTGCT GGAAAAGTCG CAGACCATCG AGGCCAATTT CTCCCAGCTG ACCCTGGATG CCGGCGGCAC CAGCCTGCAG GAGACAACCG GCAAGATGAC GGTCAAGCGC CCGGGGCTGT TCTACTGGCA CACCGATGCT CCCCAGGAGC AGGTGGTGGT GTCCGACGGC AAGAACGTCA CCCTGTGGGA CCCTGACCTG GAGCAGGCCA CCATCAAGAA GCTCGATGTG CGCCTGAACC AGACCCCGGC GCTGCTGCTG TCCGGTGACG TGTCGAAGAT CAGCCAGAGC TTCGACATCA CCTCCAAGGA GCAGGGCGAA GTGATGGACT TCACCCTCAA GCCAACGACC AAGGACACCC TGTTCGATTC GCTGCGTGTG TCGTTCCGCC GTGGCCTGAT CAACGACATG CAACTGATCG ACAGCGTCGG CCAGCGCACC AACATCCTGT TCAATGGCGT CAAGGCCAAC CAGGCGGTGC CGGACAGCAC CTTCAAGTTC GACATCCCGA AAGGCGCGGA CGTCATCAAG GAGTAA
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Protein sequence | MRAIRMLLVS ALTLGSLSAT LSAHAGEQDV QRLTQLLEKS QTIEANFSQL TLDAGGTSLQ ETTGKMTVKR PGLFYWHTDA PQEQVVVSDG KNVTLWDPDL EQATIKKLDV RLNQTPALLL SGDVSKISQS FDITSKEQGE VMDFTLKPTT KDTLFDSLRV SFRRGLINDM QLIDSVGQRT NILFNGVKAN QAVPDSTFKF DIPKGADVIK E
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