| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3404 |
|---|
| Symbol | |
|---|
| ID | 6112357 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 3746079 |
|---|
| End bp | 3747359 |
|---|
| Gene Length | 1281 bp |
|---|
| Protein Length | 426 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641623187 |
|---|
| Product | seryl-tRNA synthetase |
|---|
| Protein accession | YP_001750257 |
|---|
| Protein GI | 170722569 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0172] Seryl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00414] seryl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.25013 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGATT CCAAACTGTT ACGCGGCCAA CTTCAGGAAG TGGCGGACCG CCTCGCCTCC
CGTGGCTTCA GCCTGGATGT CGCGCGCATC GAATCGCTGG AAGAGCGCCG CAAGGCGGTG
CAGACCCGCA CCGAGCAGCT GCAGGCCGAG CGTAACGCCC GCTCCAAATC GATCGGCCAG
GCCAAAGCCA AGGGCGAGGA CATCGCGCCG CTGATGGCTG ATGTCGAGCG CATGGCCAAT
GAGCTGGCCG CTGGCAAGGT CGAGCTGGAC GGCATCCAGG CCGAACTGGA TGGCATTGTC
CTGACCATCC CCAACCTGCC GGACGCCAGC GTGCCGGTCG GTGCCAGTGA GGACGACAAC
GTCGAAGTGC GCCGTTGGGG CACCCCGAGG GCATTCGATT TTGCAATCAA GGACCACGTC
GCCCTGGGCG AGATCAGCGG TGGCCTGGAC TTCGAAGCAG CTGCCAAGCT GTCGGGCGCC
CGCTTTGCCG TGCTGCGCGG CCCGATTGCC CGCCTGCACC GTGCCCTGGC GCAGTTCATG
ATCAACCTGC ACACCGGTGA GCATGGCTAC GAAGAACACT ACACCCCGTA CCTGGTCCAG
GCTCCGGCCT TGCAGGGCAC CGGCCAGTTG CCGAAATTCG AGGAAGACCT GTTCAAGATC
ACCCGCGAAG GCGAAGCCGA CTTCTACCTG ATCCCGACCG CTGAAGTGTC GCTGACCAAC
CTGGTGGCCG GCGAGATTAT CGACGCCAAG CAGCTGCCGC TCAAGCTGGT CGCCCACACC
CCGTGCTTCC GCAGTGAAGC TGGCGCTTCG GGCCGTGACA CGCGCGGCAT GATCCGCCAG
CACCAGTTCG ACAAGGTCGA GATGGTGCAG GTGGTCGAGC CGTCCAAGTC CATGGAAGCC
CTGGAAGGCC TCACCGCCAA CGCCGAGCGC GTGTTGCAGC TGCTGGAACT GCCCTACCGC
GTACTGGCCC TGTGCACCGG TGACATGGGC TTCGGCGCCG TGAAGACCTA CGACCTGGAA
GTGTGGGTGC CGAGCCAGGA CAAGTACCGC GAGATCAGCT CCTGCTCCAA CTGTGGTGAC
TTCCAGGCGC GCCGCATGCA GGCCCGCTGG CGCAACCCGG AAACCGGCAA GCCGGAGCTG
GTGCATACCC TCAATGGCTC GGGCCTGGCT GTAGGCCGTA CCCTGGTCGC TGTGCTGGAA
AACTACCAGC AGGCTGATGG CTCCATTCGT GTGCCGGAAG TGCTCAAGCC CTACATGGGC
GGTGTCGAGG TCATCCGCTA A
|
|---|
| Protein sequence | MLDSKLLRGQ LQEVADRLAS RGFSLDVARI ESLEERRKAV QTRTEQLQAE RNARSKSIGQ
AKAKGEDIAP LMADVERMAN ELAAGKVELD GIQAELDGIV LTIPNLPDAS VPVGASEDDN
VEVRRWGTPR AFDFAIKDHV ALGEISGGLD FEAAAKLSGA RFAVLRGPIA RLHRALAQFM
INLHTGEHGY EEHYTPYLVQ APALQGTGQL PKFEEDLFKI TREGEADFYL IPTAEVSLTN
LVAGEIIDAK QLPLKLVAHT PCFRSEAGAS GRDTRGMIRQ HQFDKVEMVQ VVEPSKSMEA
LEGLTANAER VLQLLELPYR VLALCTGDMG FGAVKTYDLE VWVPSQDKYR EISSCSNCGD
FQARRMQARW RNPETGKPEL VHTLNGSGLA VGRTLVAVLE NYQQADGSIR VPEVLKPYMG
GVEVIR
|
|---|
| |