Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_3341 |
Symbol | |
ID | 6112292 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 3682477 |
End bp | 3683790 |
Gene Length | 1314 bp |
Protein Length | 437 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641623123 |
Product | outer membrane porin |
Protein accession | YP_001750195 |
Protein GI | 170722507 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCGTAG TTAAAGGTCT TTTGTATCCG TTGCCTCTCT TGATTGGTTT TGCTTGCGCG CCCTCTGCAC TTGGTGCTTT TCTGAAAGAT TCAAAGCTAA ATCTTAATCT GCGTAACTTC TATATAAATA CGGACTATCG AGAGGGACAT GCCGGAACCT CGAAGGCCGA GGAGTGGGGA CAGGGTTTTC GATTGTTGTA TGAGTCCGGT TATACCGATG GAAAAATTGG AGTTGGTGTG GATGCTCTTG GCTTGTTGGG TGTGAAGCTG GATAGTGGGA AGGGTCGTCA TCAGGGTAGT ACCACACTTA CTTCTGACGG TGACCATGCC GCTGACCAGT GGAGTCGATT TGGGGCGACG CTAAAACTTA AGGCATCAAA AACCGATCTG CGCGTTGGTA CGTTGATGCC TAAGTTACCC GTTCTCGTGT TTACCGATAC TCGACCTCTT CCACAGACCT ACCAAGGGGG CATGGTGACT TTACGCGAGT TAGACGATAT TACGCTAACG GCAGGTAAGA TCACCCAAGT TACAGGAGTC GCTTCAGCTG ATCGTACTGG TATGGCTGTT GCGGGAGGAC GGCGACAGAG TAATGACTTC CGTTTCGCAG GGGTCGACTA CCGAACACGG GACAATTTTT TGCTCCAGTA TTATCAAGCC GCCCTAGAGG ATTACTATAG CCAACAGTTT CTGGGTGTTT CCCATATTTG GAAAGTTACC GAAGGGCGAA GCTTGAAGAG TGATCTGCGT TACTTTCGTT CGCGTGGTAT CGGAGCCAAT GCTGCCGGTG AACCAGGCTA TCAGATAGCG GGATATACTC CTGACCACCG TGGTGAGATC GATAACGATA CTTGGAGCTT GGCGTTTACC TATGCTGTTG GCGGGCACAG TTTTATGCTG GGGTATCAGA GCGTATCGGA TGACAGTGAT TTTGTTCACC TTAATCAGGG CAGCCTGAGC GGTGACCTTG GAGCGAGAGG TGCAAGTACA TACTTGATCG CCGAGCGGTT GCAGTCATAT TTTGGTCGTG CTGGTCAAGA CACACAGATC GCCCAGTATA GCTACGATTT TGCAGCGAAG GGTATCCCAG GCTTGAATGT GACTGTTGCT CACCAAGATT CAGAGGGTAT TCAGAGTTTC GCTGGTAGCT CACTTCGTGA GCGAGAAACT GACATTATAC TTACCTATGC AGTCCGAAGC GGGCCGTTAC GGGGCTTAGG TCTGGGCTTG CTTTATGGAG AGCTGAATAG TGAAGTAACT CCAGATCAGA ATCAGCTTCG GTTGATGGTG AGCTATAATG TCGAGTTGTT TTGA
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Protein sequence | MSVVKGLLYP LPLLIGFACA PSALGAFLKD SKLNLNLRNF YINTDYREGH AGTSKAEEWG QGFRLLYESG YTDGKIGVGV DALGLLGVKL DSGKGRHQGS TTLTSDGDHA ADQWSRFGAT LKLKASKTDL RVGTLMPKLP VLVFTDTRPL PQTYQGGMVT LRELDDITLT AGKITQVTGV ASADRTGMAV AGGRRQSNDF RFAGVDYRTR DNFLLQYYQA ALEDYYSQQF LGVSHIWKVT EGRSLKSDLR YFRSRGIGAN AAGEPGYQIA GYTPDHRGEI DNDTWSLAFT YAVGGHSFML GYQSVSDDSD FVHLNQGSLS GDLGARGAST YLIAERLQSY FGRAGQDTQI AQYSYDFAAK GIPGLNVTVA HQDSEGIQSF AGSSLRERET DIILTYAVRS GPLRGLGLGL LYGELNSEVT PDQNQLRLMV SYNVELF
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