| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3260 |
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| Symbol | |
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| ID | 6112212 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 3601556 |
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| End bp | 3603094 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641623045 |
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| Product | EvpB family type VI secretion protein |
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| Protein accession | YP_001750117 |
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| Protein GI | 170722429 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3517] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03355] type VI secretion protein, EvpB/VC_A0108 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.177977 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGAAG ATCAATCTTC TGCGCAATCG CGTGGCGCCA CCGTGCAGGT GGAAGAAAAC
CAGAGCGTCT ATCACGCGCT GTTTGAAAGA ATAAACCTTG AGCCGCTTGA ACAGATGGGT
GGCATTGAGG TGTTCCAAAG TATCGATGCG TTGTCAGAAG CGACAGCTAA TGAGCGCGTT
ACTGCTTCGG TGAGCGTTTT TCTGGACCGT CTCAAACAAG TCTCTCCGAA GGTGGAAAGG
CTCGACAGGG CTCTACTGGA TGAGCACATC GCCTCGATTG ACGCTCAGAT CAGCAGCCAG
CTGGACGCGG TCATGCATCA CCCGGATTTT CAACGGGTCG AATCAATCTG GCGCGGCGCG
AAGTCGTTGA TTGACCAAAC GGATTTCCGT CAAAACGTCC GAATTGAGCT GCTCGATATC
AGTAAGGAGC ATCTGGCGCA GGACTTTGAA GACGCGCCGG AGATCGCGCA AAGCGGTTTG
TATCTGCATA CCTATACCCA GGAATACGAT ACGCCTGGTG GTGAGCCTAT CGCGGCGGCA
GTTTCGAATT ATGAGTTTGG GCGAGGGGCG CAAGATATCG CATTGTTGCG CAATGTTTCG
AAAGTGGCGG CTGCATCCCA TATGCCGTTT TTGTACTCGG TTGGTCCGGC CTTCTTCGGA
AAAAACACCA TGGAGGAAGT GTCCGCGATC AAGGATATCG GTAACTACAT GGATCGTGCG
GAGTATATTA AGTGGCACGG CTTCAGGCAA ACTGACGATG CTCGTTATGC GGGCGGGATA
ACACCCCGCA CATTAGGGCG CTTGCCTTAT GGGCCTGATA CGAACCCTGT GCGATCTTTC
AACTATGTGG AGCGAGTCAA GGGGCCGGAT CACAGCAAGT ATTTATGGGT AAGCTCGACA
TTCGCGTTCG CGGCGAACAT GGTTAAGAGC TTTATTGCCA ATGGATGGTG CGTGCAGATT
CGAGGGCCAC AGTCGGGTGG CGCGGTTACC GACCTGCCGA TTCATTTGTA CGACATGGGG
ACGGGTAGTC AAGTCAAGAT CCCCTCGGAA GTTATGATTC CGGAGACCCG AGAGTTTGAA
TTTGCCAATT TGGGCTTGAT TCCGCTCTCG TATTACAAGA ATCGTGACTA CGCATGTTTC
TTCTCGGCCA ACTCAGCGCA CAAGCCGGCA ATCTATGACA CGGCGGAGGC CACGGCAAAT
AGTCGTATCA ATTCGAGGTT GCCCTATGTG TTCCTGCTTT CTCGCATTGC ACATTATTTG
AAAGTTATCC AGCGGGAGAA TATCGGTACA ACTAAAGACC GTCGCCTGTT GGAGTTGGAG
CTCAATAGAT GGGTCAGTGG CCTGGTCACC GAGATGACCG ATCCGGGAGA TGACTTGCAA
GCTTCCCACC CGCTGAGAGA GGCAAAAGTG GTTGTCGAGG ACATTGATGA CAACCCGGGC
TTCTTCAGGG TCAAGTTGTT CGCTGTGCCG CATTTCCAGG TTGAAGGTAT GGACATCAAC
CTCTCATTGG TTTCGCAGAT GCCCAAAGCA AAATCTTGA
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| Protein sequence | MSEDQSSAQS RGATVQVEEN QSVYHALFER INLEPLEQMG GIEVFQSIDA LSEATANERV
TASVSVFLDR LKQVSPKVER LDRALLDEHI ASIDAQISSQ LDAVMHHPDF QRVESIWRGA
KSLIDQTDFR QNVRIELLDI SKEHLAQDFE DAPEIAQSGL YLHTYTQEYD TPGGEPIAAA
VSNYEFGRGA QDIALLRNVS KVAAASHMPF LYSVGPAFFG KNTMEEVSAI KDIGNYMDRA
EYIKWHGFRQ TDDARYAGGI TPRTLGRLPY GPDTNPVRSF NYVERVKGPD HSKYLWVSST
FAFAANMVKS FIANGWCVQI RGPQSGGAVT DLPIHLYDMG TGSQVKIPSE VMIPETREFE
FANLGLIPLS YYKNRDYACF FSANSAHKPA IYDTAEATAN SRINSRLPYV FLLSRIAHYL
KVIQRENIGT TKDRRLLELE LNRWVSGLVT EMTDPGDDLQ ASHPLREAKV VVEDIDDNPG
FFRVKLFAVP HFQVEGMDIN LSLVSQMPKA KS
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