| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3246 |
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| Symbol | |
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| ID | 6112198 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 3578580 |
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| End bp | 3580166 |
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| Gene Length | 1587 bp |
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| Protein Length | 528 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641623031 |
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| Product | type VI secretion-associated protein |
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| Protein accession | YP_001750103 |
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| Protein GI | 170722415 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3515] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03362] type VI secretion-associated protein, VC_A0119 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.644399 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCTGA AAAGACTGGT AGAGAGCTGT TTGCCCACCA GCGAGCCGCT GGTCATTGCC
CGCAAACACG GCGAATCCTG GGAGCCTTGG CTAACGCCTA TCAACGGCGA TGTACCGGTG
GGAGAGGACC CGGGCTACGA CGACGACTTC CAGCGCATGC GCGAAGAGGT CAACAAACTC
TCCGGGGCGG ATGTGGACCT TGTTGCGCAA CTGGCGCATA AGCTACTCCA GCAGTCCTGC
AAAGACCTTC GTGTTGCCAC CTACTACCTC TGGGCACGTT TGCACAGGGA CGGTGAGACC
GGCTTGGCAG ATGGCCTGAG TTTGCTGGCG GCGCTGATGG AACGCTATGC CTCCGACATC
CTGCCGGCGC GTCCCAATAG CCGCAAGATG GCCTTGGAGT GGCTTGCCGG CAGCAGGGTC
CAGGCAAGCC TGTCGCTGTA CCCTCAAGTG GTCAAGGCTG AAACCGAGCG AACGGTGGCT
GCTTTGGTGT GGTTGGAGCA CGGCTTCAGC CATTGGCCAG AAGACCAGCG GCCACGACTG
GACGCCTTGT ACGGCGCCCT CAACAGTCGA CTCGCCGCGT CGGGAGGTGT TGATGCAATC
GTCCCCCAGA CTGGCAGTGA GTCACCTGGA GACGGTAGGG CGGCAAGCCC GAGCCCGACC
CCCATAAAGT CGGGCCGAGA TTTGCTGGAC AGTGGTAGAG GGCTAGCCAG CTATCTACGT
GATCAACCAG AAGGGTGGTT GGCGGCGCAT CGGCTGATGA AGAGTTTGCG CTGGGACACC
GTGCATCAGG TGCCGCCGCA AACTGCCCAG GGGATTACCC GCCTGGCGCC GCCTCGCGGC
GAGTATCGCG CTCAGCTCAA GCGCTTGCAC CTGCAGCAAA GCTGGAGCGA GTTGATTGAT
CAGGTCGAGC AAATGTATGC CGAAGGCGTC AACCACTTCT GGTTGGATCT GCAATGGTAT
CTCCATCAGG CCTTGAGCAA ATCCGCTGAG CCCTACAAAA GCTGGGCGGA TATCGTCAAA
CACGATCTGG CCATGCTGCT GCACCGTCTG CCGGGCGTGG AGCTGCTGTG TTGGAGCGAT
GGCTCGCCAT TCGCCGATGA AGCCACGCGT GAGTGGATCA ACCAGCAGGT CAGCGGTAAC
CGCCCAGAAC AATGGCTGCC CACAGCGGCC CCCGCATCGT CGGCGGCTGC ATGCGAAATA
CTCGTCTTGG AACCCGAGGC ACTGGCGCAA GCGGATGCTG ATGGCGTGGA GCAGGCACTG
GCGTGGCTGG CGAGCCGTCC AGATGTGCAG ACCGGGCGGC AACGTTGGTT ACTGCGTTTG
TTGATGGCGC GAGTGGCCGA ACAGTGCGGC AAGGCAGAGC TGGCCATTCA TTTGTTCACT
GAGCTCGACG CTGCCGCGCA ACGCCACACA TTTGCCGACT GGGAGCCCGA CCTGCTCTTC
GAGGTCAAGG CGCGTTTACT CAAGCTGCTG CGTTTGAAAG CCCAGCGCAA CGATGCTGAC
CGGCCTGCGT TGGCGCGGCA AATGGAACAT CAGTTGGCAG CACTTGTATC CATTGACCCG
GTACGTGCTG CAGTCCTGTG CAGCTAA
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| Protein sequence | MSLKRLVESC LPTSEPLVIA RKHGESWEPW LTPINGDVPV GEDPGYDDDF QRMREEVNKL
SGADVDLVAQ LAHKLLQQSC KDLRVATYYL WARLHRDGET GLADGLSLLA ALMERYASDI
LPARPNSRKM ALEWLAGSRV QASLSLYPQV VKAETERTVA ALVWLEHGFS HWPEDQRPRL
DALYGALNSR LAASGGVDAI VPQTGSESPG DGRAASPSPT PIKSGRDLLD SGRGLASYLR
DQPEGWLAAH RLMKSLRWDT VHQVPPQTAQ GITRLAPPRG EYRAQLKRLH LQQSWSELID
QVEQMYAEGV NHFWLDLQWY LHQALSKSAE PYKSWADIVK HDLAMLLHRL PGVELLCWSD
GSPFADEATR EWINQQVSGN RPEQWLPTAA PASSAAACEI LVLEPEALAQ ADADGVEQAL
AWLASRPDVQ TGRQRWLLRL LMARVAEQCG KAELAIHLFT ELDAAAQRHT FADWEPDLLF
EVKARLLKLL RLKAQRNDAD RPALARQMEH QLAALVSIDP VRAAVLCS
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