| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3245 |
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| Symbol | |
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| ID | 6112197 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 3576787 |
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| End bp | 3578556 |
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| Gene Length | 1770 bp |
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| Protein Length | 589 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641623030 |
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| Product | type VI secretion protein |
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| Protein accession | YP_001750102 |
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| Protein GI | 170722414 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3519] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03359] type VI secretion protein, VC_A0110 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACTACGG ACAACCTAAC CCTGCGTTAC TTCGACGCTG AAATGCGCTA CCTGCGGGAA
GCGGGCAAGG AGTTTGCCCA AGCTTTCCCG GATCGGGCGG CGCAGCTCAA CCTGGATAAG
CCCGGCGCTG AAGACCCCTT TGTTGAGCGT TTGTTCGAAG GCTTTGCGTT CCTGATGGGG
CGTCTGCGTG AGAAATTGGA CGATGACTTG CCAGAACTGA CCGAGGGGCT GGTGAGTCTC
CTGTGGCCCC ACTACTTGCG CACCATCCCG TCACTGGCCA TCGTCGAACT GATGCCAGAT
GTCAGTCAGA TGAAAGGCTG CGAGGCGGTC GCAAGAGGCT TTCAGGTGCT ATCACAACCG
GTGGGTCAGC ACCGTACCCG CTGCCGCTAC TCCACCACGC AGGATTTGAC GCTACGACCG
CTCAATCTGG AAACCGTGCG ACTTGACCAT GAGTCAGATG GGCGTGCAGT TCTACGCCTA
CGCTTCGCGC GTGGAGCACT GGCCAGCTGG GATCAACTCG ACCTCGCGCA TATCCCCTTG
TATCTGAATG GCGACGCGGC GCTTGCCAGT GTGCTGCACC AGGCGCTGAC ATTGAATGTG
CAGGCGCTGC ATGTGCGCTT GCCAGGCGAG GCGCAGCGCA AGGCATTTGC GGGGCAATTC
AAGCCAAAGG GGTTTGCGGA CGATGATCGC CTTTGGCCAA AAGGCGACAG CGCCTTCAGC
GGTTATCAGT TGTTGCTGGA GTACTTTACG TTCCGCGAGA AGTTCATGTT CGTGACGCTC
TGCGGCCTGG AATCGCTCGT GCTGCCTGCG GACGCGCCCT GGTTCGAACT TGAAGTAGTA
CTCAGTGAGA CGTGGTCGCA TACGTTTACG CCGACGCAAG AGCACATTCG TTTGCACGCG
GTCCCCGTGA TCAACTTATT TGCACTGGAG GCTGATCCAC TCATCTTGGA CCCGTTGCAG
AATGAATACT TGCTTCGCCC GATGCGCTTG CAGGACGGTC ATACAGAGAT CTACTCGGTA
GACAAGGTTT CTGGAGCGAA AGACAGCGTT CGTCAGGATT ACGTGCCGTT CAGCAGCTTT
CGTCACAAAG GGGGGATGCT TCGCGATGAG GCCCCCGAGC GCTATTTTCA TACCCGCCTG
AGACGCGGCG CCAATGGTCT TCATGATACT TGGCTGATTC TTGGCGGGGA GGGCTTTGAC
AAGGATGTAT TGCTCAATCG CAAAAGCCTG TCGTTGCGCC TGACCGGCAC CAATGGCCAG
CTGCCGCGCA AAGCCTTGCG CAGCACCTTG CTCGATGCTG CGGCGCAGTC CACCCAGGCA
GGTTTGCGAG TGCGCAACCT GACCGCGCCG ACATTACCGT GCTACCCACC CAATCGCGAC
CGTTTTCACT GGCGAGTACT CAGTCACCTG GGGTCGAATT TTCTACCGAT GCTCAACAGT
GCAGAAGTAC TGCGTGGCAC GTTGGCCTTG TACGAGTGGA CGGGTAGCGA AACCAACCGC
CGCCGTCTGG AGGCCATTGT CGACGTCAAG CATCACCTGA TCCAGCGCTT CGAAAAAGGC
TTCTTGCTGC GAGGTGTGGA TATCGAAGTG ACGGTCGATA GCAATGGCTT TTCAGGCGAG
GGGGATATCT GCCTGTTTGG TGAAATGCTC AGCCGGTTCT TCGCTCTGTA TGCGGACATT
CATTTGTGCA CTCAACTGAC GATGATTTTG CAGCCGACGG GGAGGTGCCT GCGATGGAGC
GAACATCACA GTCAGCGTAT TCCCGGTTGA
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| Protein sequence | MTTDNLTLRY FDAEMRYLRE AGKEFAQAFP DRAAQLNLDK PGAEDPFVER LFEGFAFLMG
RLREKLDDDL PELTEGLVSL LWPHYLRTIP SLAIVELMPD VSQMKGCEAV ARGFQVLSQP
VGQHRTRCRY STTQDLTLRP LNLETVRLDH ESDGRAVLRL RFARGALASW DQLDLAHIPL
YLNGDAALAS VLHQALTLNV QALHVRLPGE AQRKAFAGQF KPKGFADDDR LWPKGDSAFS
GYQLLLEYFT FREKFMFVTL CGLESLVLPA DAPWFELEVV LSETWSHTFT PTQEHIRLHA
VPVINLFALE ADPLILDPLQ NEYLLRPMRL QDGHTEIYSV DKVSGAKDSV RQDYVPFSSF
RHKGGMLRDE APERYFHTRL RRGANGLHDT WLILGGEGFD KDVLLNRKSL SLRLTGTNGQ
LPRKALRSTL LDAAAQSTQA GLRVRNLTAP TLPCYPPNRD RFHWRVLSHL GSNFLPMLNS
AEVLRGTLAL YEWTGSETNR RRLEAIVDVK HHLIQRFEKG FLLRGVDIEV TVDSNGFSGE
GDICLFGEML SRFFALYADI HLCTQLTMIL QPTGRCLRWS EHHSQRIPG
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