Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_3232 |
Symbol | |
ID | 6112184 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 3566533 |
End bp | 3567333 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641623019 |
Product | diguanylate phosphodiesterase |
Protein accession | YP_001750091 |
Protein GI | 170722403 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2200] FOG: EAL domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.72536 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.33635 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCCGA ATGATATTTC CCTCGTATCG AACCGCCCCG TTGGCTGCCG AAACTGCAGG GACGGCCGGA AACTGGATTT TGAGTTCAGT ATGGCTTTCC AACCCATAGT CAACGTAAGT AGCCAAAGCA TATTCGCCTA TGAGTCGCTT GTTCGCGGAA CGGATGGAAG TGGTGCCCAG GGAATTCTGG AGAGAGTCTC CGAAGAAAAC CGCTATGCCT TTGACCAGGC ATGCCGGGTC AAAGCGGTCG AATTGGCTGC GAAACTCGAA GTGCCCTGTT ACCTGAGCAT CAACTTCCTG CCTAACGCAG TCTACCAGGC GGCAACCTGC ATTCGCGCCA CACTGGATGC GGCTCGGCGA TTCGACTTCC CGACCAACCG CATCATCTTC GAGATAACCG AGAACGAGCA GGTCGTAGAA AAGCAGCACC TCAAGGAAAT CATGCTCGAA TACAAGCGGC AGGGCTTTAA AACAGCCATC GACGACTTCG GTGCGGGTTA CTCAGGGCTC GGGCTGCTGG CGGAGTTCCA GCCCGACATC ATAAAGCTCG ATATGCAGCT CATCAGGAAC ATTCACAACG ACAAAGCCAG GACGGCCATT ACCGAAGGAA TTCTCAGTTT CTGCAGGGCA CTTGAGATAT CGGTGATCGC CGAAGGCGTG GAAACGCGGG ACGAATATGC AAGGCTGCGG AGCCTGGGAG TCGAGTTGTT CCAAGGCTAC CTATTTGCGC GTCCTCATTT CGAGGCGCTG CCCGAGGTGA GCTGGCCGCC CGAGTCGGAT GCTATGGAGC AGCAGGCATG A
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Protein sequence | MNPNDISLVS NRPVGCRNCR DGRKLDFEFS MAFQPIVNVS SQSIFAYESL VRGTDGSGAQ GILERVSEEN RYAFDQACRV KAVELAAKLE VPCYLSINFL PNAVYQAATC IRATLDAARR FDFPTNRIIF EITENEQVVE KQHLKEIMLE YKRQGFKTAI DDFGAGYSGL GLLAEFQPDI IKLDMQLIRN IHNDKARTAI TEGILSFCRA LEISVIAEGV ETRDEYARLR SLGVELFQGY LFARPHFEAL PEVSWPPESD AMEQQA
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