Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_3155 |
Symbol | |
ID | 6112105 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 3493720 |
End bp | 3494682 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641622940 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001750014 |
Protein GI | 170722326 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCTCA AACAGCTCCG CTACCTGATC GCAATCGTCG AAGCCGGCAG TTTTTCCTCG GCTGCGCGTC GTGCCTACAT CGCCCAGCCA GCGTTGAGCA GGCAGATCGG CCTGCTGGAG AGTGAACTGG AAATGCAGTT GCTCGACCGC CAGCACGACG GCATTGTCCT GACCGACGCC GGTCGGCAGC TTTACGAGGT GGCCCGCCAG GTGGTGCAGA AGCTCGATTC GGTGAAGGAC GAGCTCAAAT CAAGCCGCGG TGACCCCAAG GGGCACGTTG CCATTTCCAT TCCGGCCACT GCCGCAGACC TGCTGCTGCC GGAAATCCTC AAGCGTGCCG AACAGCGCTT TCCCGGCGTG ACATTGACCG TGTGGGATGG CCTGAGCCGC AACGGTGGCC AGGCCATCGA ACTGGGCAAG GTTGACTTCG GCGTGGTGCC CAACGCCGAG GAGCTTGAAC ATGTCGAAGC CGAGGCGATC TTTACCGAGG CGCTGTACTG GGTCGGCCCT TCAGCTGCCG GCGCTGCCGA CACCATTACC CTGGCCGAAG CCGCCGCCAC GCGGCTGGTG CTGCCACCAA GGGCGCTGCA CCTGCGCCGG CGCATCGAAC AGGCGGCCAT GGAAGCCGGC GTGCCTTTGG CGGCCGCCTA CGAGCAACAA GCGGCACCCG GCATAGCCAG CCTGGTGCGC GCAGGGCTGG CGGCGACCAT CAGCAACTGG CCGCCGCTGT GTGAGCTGCT CGAACCGACG CAGGCGCGGC TCATCGTCGA GCCACGCATC AGCCGCACCA TTGCCCTTGC GCACTCACGG CACAAGCCCC TGTCGTTTGC CGCCGGTTGC TTGCACGACC TGGTGCGCGG GCTGCTGATC GAACTGGTAC TCGGCGGCCG TTGGCGTGGT GAGCTGATCG GCGGCGATGA CGCGCCGCTC GGGTCGGTGC CGGGGGTTCA GCTGGCTGTC TGA
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Protein sequence | MTLKQLRYLI AIVEAGSFSS AARRAYIAQP ALSRQIGLLE SELEMQLLDR QHDGIVLTDA GRQLYEVARQ VVQKLDSVKD ELKSSRGDPK GHVAISIPAT AADLLLPEIL KRAEQRFPGV TLTVWDGLSR NGGQAIELGK VDFGVVPNAE ELEHVEAEAI FTEALYWVGP SAAGAADTIT LAEAAATRLV LPPRALHLRR RIEQAAMEAG VPLAAAYEQQ AAPGIASLVR AGLAATISNW PPLCELLEPT QARLIVEPRI SRTIALAHSR HKPLSFAAGC LHDLVRGLLI ELVLGGRWRG ELIGGDDAPL GSVPGVQLAV
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