Gene PputW619_3146 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_3146 
Symbol 
ID6112096 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp3483771 
End bp3484202 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content62% 
IMG OID641622931 
Productthioesterase superfamily protein 
Protein accessionYP_001750005 
Protein GI170722317 
COG category[R] General function prediction only 
COG ID[COG0824] Predicted thioesterase 
TIGRFAM ID[TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.433869 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAGGG AACGCCCGCT GCGCGGCGCC TATCGCCACT TCCAGCCGAT CACCACGCGC 
TGGCACGACA ACGATCTGTA TGGGCATGTG AACAATGTCG TCTACTACGG GTTTTTTGAC
AGCGCCGTGA ACACCTGGCT GATCGAGCAT GCCGGTCTGG ATATCCACCG CGACCCGGTG
GTGGCCTATG TGGCCGGGTC TGCTTGTGAC TACTTCGCCG CGGTCGCCTT TCCGCAACGC
ATCGAAGTGG GTATCGCAGT CACGGGGACA GGGAACAGCT CGGTGCACTA CGCGCTGGCT
GTTTTCGTCG AGGGGGAGCC TGAAGCGTGC GCAGCCGGTC GCTTTACCCA TGTGTTCGTT
GATCGTCGTG AGCAGCGCGC GGTTGCCATA CCAGGCAAGG TGCGCATGGC CTTGGAACTG
TTGGCTGTCT GA
 
Protein sequence
MARERPLRGA YRHFQPITTR WHDNDLYGHV NNVVYYGFFD SAVNTWLIEH AGLDIHRDPV 
VAYVAGSACD YFAAVAFPQR IEVGIAVTGT GNSSVHYALA VFVEGEPEAC AAGRFTHVFV
DRREQRAVAI PGKVRMALEL LAV