| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3129 |
|---|
| Symbol | |
|---|
| ID | 6112079 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 3466065 |
|---|
| End bp | 3466964 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 641622914 |
|---|
| Product | AraC family transcriptional regulator |
|---|
| Protein accession | YP_001749988 |
|---|
| Protein GI | 170722300 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATGTCA TAGAGCGGAC TTCAGCCCAT GGTTTGGAGG CTTACATTCG GGGTGAGCGG
CTTGCCGCCT CGGACGTCCT GGCCGATAGG GATATGTTGG TGCAGATCTT TAACCGGGAG
CGTAACGAAG AGAGCTTTAT CGTGCCCGCC GTAGCTGAGC CCTTGCTCGT GTGGATCATC
TCCGGGAATG CTGCCGTTCA GGAGCGTGAG CTTGACGGCG ACTGGCAATG TAGCCAGGTG
TCCAAAGGTG ATTTCTTCTT GACTACTTCG GCACAGCCTT ACGAGATGCG CTGGAACGTA
GACGGTGTAG AACCATTTGA AGTCATGCAT ATCTACCTCG GCATCCCGCT TTTGGAAAAA
GCCATCCATG AGGTCTTGGG CGGGTCTGTG GAAGCGGTTC GACTACGTGA AGTCTCAGGC
GGGCGTGACG TTGGGTTGTC CGTTCTATTG GAGCAAGTTC GCCTGGAGCT GACGGGGCAC
AGGGCCAGTC CACTTTATCT GCAGGGTCTG GCCCAGTGCA TCGCCATTCA CCTTGCCCGC
AGCTACCTAG ACAGCTCAGC GGACGATATC GTGCACCGCA ACGCATTGCC TGCTTACAAG
CTGCGCCGCG TGCTGTCGGC GATGGAGGCG AATCTGGCTG AGGAATTCAA TCTCGGGCAC
TTGGCCGAAA TAGCTGGGAT GAGCGAGTAT CACTTCAGCC GGCTGTTCAA AAAAGCCGCT
GGTTATTCTC CGTCGCAGTT CTTCATCAGA CTGAGGATGG TAAGAGCCCG GCAGCTCCTG
GTCGAAACGG ATCGGAGCGT GATCGATATA GGCTTGGAGA TCGGATACAG CAGCCCAAGC
CATTTTTCGC AGGTGTTCAA ACGTGAGGTT GGCGTCACGC CCACTCAATA CCGTAAATAG
|
|---|
| Protein sequence | MDVIERTSAH GLEAYIRGER LAASDVLADR DMLVQIFNRE RNEESFIVPA VAEPLLVWII
SGNAAVQERE LDGDWQCSQV SKGDFFLTTS AQPYEMRWNV DGVEPFEVMH IYLGIPLLEK
AIHEVLGGSV EAVRLREVSG GRDVGLSVLL EQVRLELTGH RASPLYLQGL AQCIAIHLAR
SYLDSSADDI VHRNALPAYK LRRVLSAMEA NLAEEFNLGH LAEIAGMSEY HFSRLFKKAA
GYSPSQFFIR LRMVRARQLL VETDRSVIDI GLEIGYSSPS HFSQVFKREV GVTPTQYRK
|
|---|
| |