| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3051 |
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| Symbol | |
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| ID | 6112001 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 3388507 |
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| End bp | 3389139 |
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| Gene Length | 633 bp |
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| Protein Length | 210 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641622836 |
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| Product | tripartite ATP-independent periplasmic transporter DctQ |
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| Protein accession | YP_001749910 |
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| Protein GI | 170722222 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.153555 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATCGC TCAGGCGTGT CTGGGAGCAC TTCGAGGAGG GCATGATCGC CTTTCTCCTG
GCGGCCATGA CCTTGGTGAC CTTCGTCTAC GTAGCACTGA ACAACCTCTA TACCGTGTTC
TACACGCTCA GTGACCACTG GGCTTTTGCC AGTGACCTGC TGCTGGGCAT CGGCGACCAC
CTGATGGGTT ACGCCCAGGA AATGACCTGG AGCATCGCCC TGACCAAGGC GCTATTCGGT
TGGCTGATCT TTTTCGGGAT CTCCTATGGC GTGCGCACCG CTGGCCACTT GGGTGTCGAC
GTACTGGTGC GGCGCACCCG CAAGCCAGTG CAACGGGTAC TGGCGATGAT CGCCTGTGCC
TGTTGCCTGG CGTATGCCGG GCTGTTCCTG GTGGCGAGCA TCAAATGGGT AAGCGCTGTG
CTTGTGGCCG GCATCGGCGC CGAAGACCTG GACCGCTATG GCATCAAGGT CGGCCATATC
GCGCTGATCG TGCCCTTCGG TTTCGCCTTG GTCATTGTCC GCTACCTGGA GATCCTCTAT
CGCCTGTTCA CCCATCGCCA GTATGGCCTG GGCCTGGCCG ACGAGGCTGC AGAGGCGAGC
AAGCTGGCCA ACCCGGGTGA GGAGCATCAC TGA
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| Protein sequence | MQSLRRVWEH FEEGMIAFLL AAMTLVTFVY VALNNLYTVF YTLSDHWAFA SDLLLGIGDH
LMGYAQEMTW SIALTKALFG WLIFFGISYG VRTAGHLGVD VLVRRTRKPV QRVLAMIACA
CCLAYAGLFL VASIKWVSAV LVAGIGAEDL DRYGIKVGHI ALIVPFGFAL VIVRYLEILY
RLFTHRQYGL GLADEAAEAS KLANPGEEHH
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