| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3005 |
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| Symbol | |
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| ID | 6111956 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 3346705 |
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| End bp | 3348171 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641622792 |
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| Product | nickel ABC transporter, periplasmic nickel-binding protein |
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| Protein accession | YP_001749866 |
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| Protein GI | 170722178 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | [TIGR02294] nickel ABC transporter, periplasmic nickel-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.441724 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTACTCAT GGCCTGTGAA TGCCGGGCCG CTCGACCCGC GTGGCTACTC CCCGAACCAG
ATGTACGCCC AGGCCATGGT CTATGAGCCC CTGGTGCGCT ATACCGCCGC GGGTACGCTG
GAGCCTTGGC TGGCTGAGGC CTGGCAGGTT TCCGATGACG GCAAGACCTA CACGTTCACG
CTTCGTGACG GCGTGCGCTT CAGTGATGGC ACACCCTTCG ACGCGCCTGC GGCCAAAGCC
AACCTCGACG CAGTGCTGGC CAACTCTCAG CGCCACCGCT GGATGGAGCT GGTGACCACC
CTGGACCACG TTGAGGCACC TGAACGCCTG ACCCTGCGCC TGGTTCTCAA GCACCCCTAC
TACCCGACGC TGATGGAACT GGCCCAAGTT CGCCCCTTAC GCTTTGCCTC GCCTCAGGCA
AAACCCGGCC AACCCGCCGG GACCGGCCCG TGGATGCGCG CCGAATCGCG CCTGGGCGAA
TACGACCGCT TCGTGCGCAA CCCTCATTAC TGGGGGCCAA AGCCGGCCTA CGGCGAGGTC
ATGGTCAAGG TCATCCCAGA CCCCAACAGC CGCGCGCTGG CCCTGCAGGC CGGCGAAGTC
GAGCTGATCC AGGGCGCCGC CGGCGAGATC ACTGCCAGCA CGTTCGTGCG CCTGCGTGAC
CAGGGCTTTG CCACCGCACT GTCGGCACCG CTGGCCACCC GCACCCTGGC GATGAACACC
GGCCGTGGCG CTACCCGTGA TCTGGCGGTA CGCCAGGCGA TCAACGAGGC GGTGGACAAG
CAAGCCATCA TCGACAAGAT CCTCTACGGC CTTGAGCCCC GTGCAGATAC CCTGTTTGCC
AGCAACATGC CCTACGCCGA TATCGGCCTC AAGCCCTACC CGTATGACCC TGTACTCGCC
GCCAACTCCC TCGATGCTGC CGGGTGGGCG CTGGCGCCAG GCGCTTCAGT GCGCAGCAAA
GGCGGCGAAC CATTGGCCAT CGAGTTGGTG TTCCTCGGCA CCAGCGCCTT GCAGAAGAGC
CTGGCCGAAG TGCTGCAGGG CGAGCTGGCG AAAATCGGCA TCCGCATCGA CCTGCGTGCG
GTTGAGGAAG GGGCGCTGGT GCGACGCCAG CGCGACGGCG ACTTCGGCAT GATCTTCGCC
GACACTTGGG GTGCGCCCTA CGACCCGCAT TCGTTCGTCA GCTCCATGCG CTACGCCGGC
CATGCCGACT ACATGGCCCA GCGTGGGTTG GCAATCAAGG ACGAACTGGA TAAGCGCATA
GGCCAGGTGC TGGCCAGCAC GGATGAGCAA CAGCGTGCCG AGCAGTACCG CTTCATCCTC
ACCACCCTGC ACGAACAGGC CGTCTACCTG CCCATCTCGC ATCTCACGGC CATCAGCGTG
CGCCGAAACT CGGTGGCCAA GGTCCAGTTC GGCAGTACGT TGTTCGATGT GCCGTTCGAA
ACCATGACAC CCAAACAGGA AGACTGA
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| Protein sequence | MYSWPVNAGP LDPRGYSPNQ MYAQAMVYEP LVRYTAAGTL EPWLAEAWQV SDDGKTYTFT
LRDGVRFSDG TPFDAPAAKA NLDAVLANSQ RHRWMELVTT LDHVEAPERL TLRLVLKHPY
YPTLMELAQV RPLRFASPQA KPGQPAGTGP WMRAESRLGE YDRFVRNPHY WGPKPAYGEV
MVKVIPDPNS RALALQAGEV ELIQGAAGEI TASTFVRLRD QGFATALSAP LATRTLAMNT
GRGATRDLAV RQAINEAVDK QAIIDKILYG LEPRADTLFA SNMPYADIGL KPYPYDPVLA
ANSLDAAGWA LAPGASVRSK GGEPLAIELV FLGTSALQKS LAEVLQGELA KIGIRIDLRA
VEEGALVRRQ RDGDFGMIFA DTWGAPYDPH SFVSSMRYAG HADYMAQRGL AIKDELDKRI
GQVLASTDEQ QRAEQYRFIL TTLHEQAVYL PISHLTAISV RRNSVAKVQF GSTLFDVPFE
TMTPKQED
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