| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3004 |
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| Symbol | |
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| ID | 6111955 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 3346093 |
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| End bp | 3346509 |
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| Gene Length | 417 bp |
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| Protein Length | 138 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641622791 |
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| Product | nickel responsive regulator |
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| Protein accession | YP_001749865 |
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| Protein GI | 170722177 |
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| COG category | [K] Transcription |
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| COG ID | [COG0864] Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain |
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| TIGRFAM ID | [TIGR02793] nickel-responsive transcriptional regulator NikR |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.37343 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACGAA TCACCATCAC GCTGGATGAA GAGCTGCTCG ACGTCATCGA TCGGCGGGTG
GCGAGCCAAG GCTACCAGGG CCGTTCGGAG GCCATTCGCG ACCTGTTGCG TGCGGGCATG
CGCGAGTCTG AAGCATTGCC GGACGATGCC GCCTGTGTGG CCGTGGTCAG CTACCTGTAC
GACCACAGCA CCCGCGAACT GCCCAGGCGG CTCAACCAGA CCCTGCATGC CCACCACGAT
CTGACCCGGT CCACCCTGCA CGTGCACCTG GACGCCGGCC ACTGCCTGGA GGTCTCGGTG
CTGCAGGGCG AAAGCGGCCG CATTGGCGAG CTGTCTCGCC AATTGATGGT CGAACGTGGG
GTGGAACATG GTCAGGTGCA GGTGATGCCG GCGCCGGGCC AGGCGAAGGT GCGCTGA
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| Protein sequence | MQRITITLDE ELLDVIDRRV ASQGYQGRSE AIRDLLRAGM RESEALPDDA ACVAVVSYLY
DHSTRELPRR LNQTLHAHHD LTRSTLHVHL DAGHCLEVSV LQGESGRIGE LSRQLMVERG
VEHGQVQVMP APGQAKVR
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