| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2951 |
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| Symbol | |
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| ID | 6111902 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 3274731 |
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| End bp | 3276650 |
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| Gene Length | 1920 bp |
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| Protein Length | 639 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641622738 |
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| Product | Fis family GAF modulated sigma54 specific transcriptional regulator |
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| Protein accession | YP_001749812 |
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| Protein GI | 170722124 |
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| COG category | [K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0236757 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.346853 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCGAC AACACTTACA AAACGCCCGG GATCCCCTGC ACCAATTGCA CGAGTCACGG
CAGGCCCGTC TCAGGCTGGC CAGCGAAGGC GAGCTACCGC CGGGCATGTT GCGCGACGAA
ATCGACGCTT CCTGGCGGCG CAGCCTTGGC CATGGCCTGG ATTGCCTGCA GGGCGAACAG
GTCGGCCTGG GCCTGGAACA AGGCCATGAC TTGCGCACGC TGCTTGAGCA AAACAGGCTG
CTGGTCGACG CGGTGACCCC CGAGCTGGAC TACCTGGTGT CACGCCAGGG CAAGGCCGGC
ATCATCATAC TCGGCGACGC CCAGGCCAAT GTGCTGGCCA TCGAAGGGCA AAAACATGTG
CTCGAGCGCG AAGGCCTGCG CGACCTGCAC CCGGGCAGCT GCTGGAGCGA ATCGCTGCGC
GGCACCAACG CCATCGGCAC CGCCGTGGTC GAAGGCCGAC CAACGCTGAT CAACTGTGGC
GAACATTACC TGGACCGGCT AAGCCCGTTC TCCTGCACGT CGGTGCCGCT GCGTGACCCG
CATGGTCAGG TGATCGGGGT GCTCGACATC ACCCGTGAAG GGGCCATGGC GCAGCCTCAG
GACAGCCTGT CGATGCTGAT GATGGCCGCC GGCAACATCG AAAGCCGGAT GTTCGGCCTG
TGCCACCCGG AGCAGATGGT GCTGGCCTTT CACAGCCGCC CGCAATACCT CAACAGTGCC
TGGCACGGCC TGCTGGCGCT GAGCCTGGAC GGCGAAGTGC TGGCCGCCAA TGACAACGCT
TGCCAACTGC TGCAGGTGCC ACGCCAGGGC CTGATCGGCC GGCGCAGCAG CGACCTGCTG
GGCGAACGCT CACCGGCCTT CATCGCGCGC CTCTGGCAGG GCGCGGTGAG CAGCGTGCAG
ACGGCCAAGG GCGAGTTCTT CTTCCGCGCC TTGCAGCTCC CGCGCCACAG CCACTTGAAT
GGCGCCAGCG CTCCCGGTAA GCCGGCCCAG GCCAACAAAT CACCCGCGTT GGAAGCCTTG
GCCGGCGGCG ATGCGCGTCT GGCGCGTAAC CTGCGCATGG CTCGCCAAGG CCTGGGCAAT
GGCCTGCCAG TGCTGTTGCT GGGCGAGACA GGCACCGGCA AGGAAGTAGT GGCACGTGCT
CTGCACCAGG CCAGCCCTCG GGCCGACAAG GCCTTTGTCG CGGTCAACTG CGCGGCGATT
CCCGAAGGGC TGATCGAGTC GGAGCTGTTC GGCTACCGCG ATGGCGCCTT TACCGGCTCG
CGCCGTGGCG GCATGGTCGG GCGGCTGATG CAGGCCCATG GCGGTACGCT ATTCCTCGAC
GAAATCGGTG ACATGCCCCT GGCCCTCCAG GCTCGACTGC TGCGTGTGCT GCAGGAGCGC
CGGGTGGCGC CGTTGGGGGC GGGCGACGAG CAGGAGATCG ACGTGGCGTT GATCTGCGCG
ACCCACCGCG ACCTCAAGCG CCTGGTGCAG GACCAGCACT GCCGTGAAGA CCTCTACTAC
CGGGTCAACG GTGTGTCGCT GCGCCTGCCG GCACTGCGCG AACGCGACGA CCTGGCATTG
ATCATCGAAG GTCTGCTGGA GAAGGCCGGC GCCAAAGCGG TGAGCCTGGA TCCTGCGTTG
GCGGCGCTGC TTGCAGCCTT CGACTGGCCG GGCAACATCC GCCAGCTGGA AATGGTGGTG
CGTACTGCCC TGGCCATGCG CGAAGACGGC GAGCAGGTGC TGACCCTCGA TCACCTCACC
GACTGCCTGC TTGACGAGCT GGCCAGCGGC AGCGCGCCCT CAGGGAACTT GAAGGACACC
GAGCTAGAAC TGATCCGCAA CGCCTTGGCG CGCCATCACG GCAATGTTTC GGCCGCTGCC
GAGGCCCTGG GCATCAGCCG GGCGACCTTG TACCGCAAAC TCAAACAGTT GCGGGGCTGA
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| Protein sequence | MARQHLQNAR DPLHQLHESR QARLRLASEG ELPPGMLRDE IDASWRRSLG HGLDCLQGEQ
VGLGLEQGHD LRTLLEQNRL LVDAVTPELD YLVSRQGKAG IIILGDAQAN VLAIEGQKHV
LEREGLRDLH PGSCWSESLR GTNAIGTAVV EGRPTLINCG EHYLDRLSPF SCTSVPLRDP
HGQVIGVLDI TREGAMAQPQ DSLSMLMMAA GNIESRMFGL CHPEQMVLAF HSRPQYLNSA
WHGLLALSLD GEVLAANDNA CQLLQVPRQG LIGRRSSDLL GERSPAFIAR LWQGAVSSVQ
TAKGEFFFRA LQLPRHSHLN GASAPGKPAQ ANKSPALEAL AGGDARLARN LRMARQGLGN
GLPVLLLGET GTGKEVVARA LHQASPRADK AFVAVNCAAI PEGLIESELF GYRDGAFTGS
RRGGMVGRLM QAHGGTLFLD EIGDMPLALQ ARLLRVLQER RVAPLGAGDE QEIDVALICA
THRDLKRLVQ DQHCREDLYY RVNGVSLRLP ALRERDDLAL IIEGLLEKAG AKAVSLDPAL
AALLAAFDWP GNIRQLEMVV RTALAMREDG EQVLTLDHLT DCLLDELASG SAPSGNLKDT
ELELIRNALA RHHGNVSAAA EALGISRATL YRKLKQLRG
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