| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2937 |
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| Symbol | |
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| ID | 6111888 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 3255103 |
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| End bp | 3256278 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641622724 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001749798 |
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| Protein GI | 170722110 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0383787 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTAACA TCCTTATCCA TCGCCTGCGC CCCGTGCCGC TCGTGGCGCT TCTGGCCATG
TTCCTGGTCG GCTGCAACGA CACCGAAGAG CAGGACACCC AGGCCCCCGT ACCCCAGGTG
CGGGTGGAAA CCCTGAAGCT CCAGCCTCTG GCCATCAGCA CGGAGCTCAG CGGGCGCATT
CTCGCCCCGC GTACCGCCGA AGTGCGCGCG CGGGTGGCGG GCGTGGTGCT CAAGCGGGTC
TACCGCGAAG GCAGCGACGT CAAGCAAGGC GACGTGCTGT TTCTGATCGA CCCGGCACCG
TTCAAGGCCG ACCACGATAG CGCCCGTGCC ACACTGGCCA AAGCCCAGGC CAACCTGTAT
CAGGCACGCT TGCAGGAGCA GCGCTACCGC GAACTGGTCG ACGACAAGGC CGTCAGCCGC
CAGGAGTACG ACAATGCCCG CGCGGCCTTC CTGCAGGCCG ACGCCGAAGT GGCCGCAGCC
AAGGCTGCGC TTGAACGGGC GCGCCTGAAC CTGGGTTACG CCACGGTAAC CGCACCGATC
TCCGGGCGCA TCGGCCGCGC CCTGGTCACC GAAGGCGCGC TGGTGGGGCA GAACGAGACC
ACGCCACTGG CAACCATCCA GCAGCTGGAC CCGATCCACG CCGACGTCAC CCAGTCGACC
CGCGAGCTCA ACACCCTGCG CCGTGCGCTA CGCGCTGGCG AGTTGCAGCA GGCAGGCAAC
GGGGAGGCAA GCGCCACGTT GATCCAGGAT GACGGCACTG CCTACCCGTT ACCCGGCAAA
CTGCTGTTTT CGGACATCAG CGTCGACCCG AGCACCAACC AGATAACCCT GCGCAGCGAG
TTCCCCAACC CTGATCTGGA CCTGCTGCCC GGCAGCTACG TGCGCGTGCG CCTGGAGCAG
GCCGTACAGC CCAAAGGCAT CAGCGTGCCG CAGCGCGCAA TCCTGCGTGA CAGCGCTGGA
GTGCCGAAAG TGCTGGTGGT CGACGCGCAG GCGCGCATCA GCGAGCGCCA AGTGGTACTG
GGCAACGCCC AGGGCGACCG CTGGATCGTC AATGAAGGCC TGGCCGCTGG CGAACGTGTA
GTGGTCGAGG GCCTGCAGCA TGTCAAGGCC GGTGACCAGG TCCTGGTCGA CACTGCCCAG
CGCAGCCAAC CCATCGCCCA GCACAACGGC CAGTGA
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| Protein sequence | MPNILIHRLR PVPLVALLAM FLVGCNDTEE QDTQAPVPQV RVETLKLQPL AISTELSGRI
LAPRTAEVRA RVAGVVLKRV YREGSDVKQG DVLFLIDPAP FKADHDSARA TLAKAQANLY
QARLQEQRYR ELVDDKAVSR QEYDNARAAF LQADAEVAAA KAALERARLN LGYATVTAPI
SGRIGRALVT EGALVGQNET TPLATIQQLD PIHADVTQST RELNTLRRAL RAGELQQAGN
GEASATLIQD DGTAYPLPGK LLFSDISVDP STNQITLRSE FPNPDLDLLP GSYVRVRLEQ
AVQPKGISVP QRAILRDSAG VPKVLVVDAQ ARISERQVVL GNAQGDRWIV NEGLAAGERV
VVEGLQHVKA GDQVLVDTAQ RSQPIAQHNG Q
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