| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2929 |
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| Symbol | |
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| ID | 6111880 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 3243267 |
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| End bp | 3244829 |
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| Gene Length | 1563 bp |
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| Protein Length | 520 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641622716 |
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| Product | threonine dehydratase |
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| Protein accession | YP_001749790 |
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| Protein GI | 170722102 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1171] Threonine dehydratase |
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| TIGRFAM ID | [TIGR01124] threonine ammonia-lyase, biosynthetic, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.333132 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAGCC TTAACGTCAG CCCCCGTACC CCGCTTACCC CTCAGCAGCT GCTGTCGGAG
CAGGTGCGGC GCATTCTGTC TGCGCCGGTG TACGACCTGG CCATCGAGAC CCCCCTGCAA
GCGGCACCAG CGTTGTCTGC CAGCCTGGGC AACCAGGTAT TGCTCAAGCG CGAAGACCTG
CAGCCCACGT TCTCGTTCAA GATCCGCGGT GCCTACACCC GGCTGGCGCG CCTGACCCCC
GCTCAGCGCG AGCGTGGGGT GATCACCGCA TCGGCAGGCA ACCACGCCCA GGGTGTGGCG
CTGGCGGCCT CCCATCTGGG CATCAAGGCG ACCATCGTCA TGCCGACCAC CACGCCTTCG
CTGAAAATCG AAGGTGTACG TTCACGGGGT GGGCATGTGG TGCTGCACGG TGAAAGCTTC
CCCCATGCGC TGGCCCATGC ACTGACCCTG GCCGACAGCG AAGGCGCGAC CTTCGTGCCG
CCTTACGATG ACCCTGACGT GATCGCCGGG CAGGGCACGG TGGGCATGGA GATCCTCCGC
CAGCAGCCGG GTGCGCTGGA TGCCATCTTC GTGCCGGTCG GGGGCGGTGG CCTGGTTGCA
GGGATCGCCG CGTACGTGAA GTACCTGCGC CCCGAGGTCA AGGTGATCGG CGTCGAGCCG
GAAGACTCCA ATTGCCTGCA GGCCGCCATG GCTGCGGGCG AGCGGGTGAT CTTGCCGCAG
GTGGGCACCT TCGCTGATGG CGTGGCGGTC GCCCAGGTCG GTGCGCATTG TTTTGAACTG
TGTCGGCATT TCGTCGATGA GGTGGTGACC GTCAGCAGCG ATGAGCTGTG TGCAGCAATC
AAGGACATCT ATGACGATAC CCGTTCGATC ACCGAGCCGT CTGGCGCGCT GGCTGTTGCG
GGCATCAAGA AGTACGTGGC CCGCGAAGGC GCACAGGGAC AGACGCTGGT GGCGATCGAC
TCCGGTGCCA ACGTCAACTT CGACCGCCTG CGTCATGTGG CCGAACGCGC CGAACTGGGT
GAGCAGCGCG AGGCGATCAT TGCCGTTACC ATCCCCGAGC AGCCAGGCAG CTTCCGGGCC
TTCTGTCAGG CGCTGGGCAA GCGCCAGATC ACCGAGTTCA ACTATCGCTA CTACCCCGGT
AAGGAAGCAC GCCTGTTTGT CGGGGTGCAG ACGCACCCGC TGCACGACCC CAGGGAGAAA
CTGCTGGCAA ACCTCGCCGA GCAGGGTTAC AGCGTGCTCG ACCTGACCGA CAACGAGCTG
GCCAAGCTGC ATGTGCGCCA TACCGTGGGT GGCCATGCGG CGTCGGGGGC CGATGAGCGG
GTGCTGCGCT TCGAGTTCCC GGAACGGCCG GGCGCATTGT TGGGCTTCCT GGAGCGGCTG
GGCAAGCGCT GGAACATCAG CCTGTTCCAT TACCGCAACC ATGGCGCGGC CGAGGCGCGG
GTGTTTGCCG CGCTGGAAGT GCCCGAGGAT GAGCAGGCAG GGCTGCCGCT GGCGCTGGAC
GAGATGGGCT ATCGGTACTG GGATGAGACC GAGAATCCCG CTTACAAGCT GTTTCTTGGG
TGA
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| Protein sequence | MTSLNVSPRT PLTPQQLLSE QVRRILSAPV YDLAIETPLQ AAPALSASLG NQVLLKREDL
QPTFSFKIRG AYTRLARLTP AQRERGVITA SAGNHAQGVA LAASHLGIKA TIVMPTTTPS
LKIEGVRSRG GHVVLHGESF PHALAHALTL ADSEGATFVP PYDDPDVIAG QGTVGMEILR
QQPGALDAIF VPVGGGGLVA GIAAYVKYLR PEVKVIGVEP EDSNCLQAAM AAGERVILPQ
VGTFADGVAV AQVGAHCFEL CRHFVDEVVT VSSDELCAAI KDIYDDTRSI TEPSGALAVA
GIKKYVAREG AQGQTLVAID SGANVNFDRL RHVAERAELG EQREAIIAVT IPEQPGSFRA
FCQALGKRQI TEFNYRYYPG KEARLFVGVQ THPLHDPREK LLANLAEQGY SVLDLTDNEL
AKLHVRHTVG GHAASGADER VLRFEFPERP GALLGFLERL GKRWNISLFH YRNHGAAEAR
VFAALEVPED EQAGLPLALD EMGYRYWDET ENPAYKLFLG
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