Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_2901 |
Symbol | |
ID | 6111852 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 3206471 |
End bp | 3207436 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641622688 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001749762 |
Protein GI | 170722074 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGACGAC AAATGAATGG CCAGATGTTC GTCTGGCTGC ATGTTTTTTC CTGCGCGGCC CGGCACCTCT CCTTCACCCG CTGCGCCGAG GAACTGCACA TCACCCCCGG CGCAGTCAGC CAGCAGATGC GGCAGCTGGA AGAGCGCCTT GGCTACCGCC TGTTCCTGCG CCGGGCACGC GGAGTGGAGC TGAGCGCCGA GGGGCAGCGC TTGGCGCAGA CCGTGGCCGA GGCCTACGGC AGCATCGAAG CAGAACTGCT GCGCCTGGAT GCAGGGGAGA TCCGCGGCAC CTTGCGCGTA CGCTCGATTC CCTCATTCCT GGCCAAGTGG CTGACACCGC GCCTGCCGCG CTTCCAGCAG CGGTATCCGG ATATCGAATT GCGCCTGGTG GCCGAAGACA GTGCGCAGGC GCTGAACCCG GGCGACTTCG ACCTGGCCAT TGACCTGAAT GATGGCAGCT ACCCGGGCAT GCTCTCGACG CCGCTGCTGG ACGAACAGAT CTTCCCCGTC TGCTCGCCAG CCCTGCTGCG CGGCCGCCCG CCACTGCACG GGCCTGCGGA CCTTGCCCAC TATCCACTGT TGCACGACAT CACTGCCTGG CGCGGCAGTT CGGACTTTGC CGAATGGGAG TTCTACCTGG AGGGCATTGG TGCGCCACGG CTGGATGTGC GCCGGGGGCA TACCTTCAAC CGCAATCACC TGACGATAGA AGCAGCAATT GCCGGGATCG GCGTGGCCAT AGCCCGACGC ACCTTACTCA ATGATGAACT GGAACGGGGC GCATTGATCG TGCCGTTCGG TGTGCCAATC GCCAATCACA AGCGCTATGT AGTGCATTAC CCACCAGGCG GGCTGAACCA GCCGGGCGCT CGTGCGGTGC ACGACTGGCT GGTGGAAGAG GCCAAAAGCT TCCTCATGCA GCACCCTGTT CAAGCCCGTA CCGCGACCAC CCGTACACCC TCGTAA
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Protein sequence | MRRQMNGQMF VWLHVFSCAA RHLSFTRCAE ELHITPGAVS QQMRQLEERL GYRLFLRRAR GVELSAEGQR LAQTVAEAYG SIEAELLRLD AGEIRGTLRV RSIPSFLAKW LTPRLPRFQQ RYPDIELRLV AEDSAQALNP GDFDLAIDLN DGSYPGMLST PLLDEQIFPV CSPALLRGRP PLHGPADLAH YPLLHDITAW RGSSDFAEWE FYLEGIGAPR LDVRRGHTFN RNHLTIEAAI AGIGVAIARR TLLNDELERG ALIVPFGVPI ANHKRYVVHY PPGGLNQPGA RAVHDWLVEE AKSFLMQHPV QARTATTRTP S
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